FMO05022.5prime Sequence
301 bp (301 high quality bases) assembled on 2008-08-11
> FMO05022.5prime
ACATTATACGAAGTTATCAGTCGACATGGCGTTTAATAGCCGGGTTTTGG
TGCCTGTCCTCAAGGCCGATGATGACGAAAAGGAGTTAGTTGATCCGCAA
GCAGCCCTTAGGGAGAAGTGCCAGGCCAAAGGTCACATTGCGTCCCTGTA
CAACAAGTATCAAGAGTGCAATGATCGTGTGAATGGCAAGTCCAAAACCA
CTGAGACATGCATGGAGGAATTGTTCGACTTCGTCGCTGAATTGGATCAT
TGCGTTGCTCACAGTCTCTTCTCGAAACTCAAAGCAAGCTTTCTAGACCA
T
FMO05022.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:18:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30354-RB | 443 | CG30354-RB | 117..374 | 26..283 | 1290 | 100 | Plus |
| CG30354-RA | 387 | CG30354-RA | 61..318 | 26..283 | 1290 | 100 | Plus |
| Ucrh-RD | 506 | CG41623-RD | 136..333 | 70..267 | 435 | 81.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:18:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8677335..8677592 | 26..283 | 1290 | 100 | Plus |
| 3L | 28110227 | 3L | 25121043..25121198 | 112..267 | 345 | 81.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:18:51 has no hits.
FMO05022.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:49 Download gff for
FMO05022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30354-RA | 57..325 | 19..293 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:18:22 Download gff for
FMO05022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30354-RA | 5..273 | 19..293 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:23 Download gff for
FMO05022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30354-RA | 57..325 | 19..293 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:23 Download gff for
FMO05022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8677331..8677594 | 19..285 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:49 Download gff for
FMO05022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4564836..4565099 | 19..285 | 98 | -> | Plus |
