Clone FMO05026 Report

Search the DGRC for FMO05026

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:50
Well:26
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15434-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO05026.5prime Sequence

335 bp (335 high quality bases) assembled on 2008-08-11

> FMO05026.5prime
ATAGCATACATTATACGAAGTTATCAGTCGACATGGGTATTACTCTGTTC
CGATTGGCCAGTTTTACTCCAAAACTGAAGGAGCTGCGAATCATTCTGGA
TCCCAAAGGAGACACTTCCAAGGGAGTCAGGGAATACGTGGAAAGGTTCT
ATCCAAACCTGAAGAAGAGCAATCCCGACCTGCCGATCCTCGTGCGCGAG
TGCTCTGGCGTCCAGCCCCGCCTCTACGCCCGCTATGGCAACGGCAAGGA
AGTGTCCCTCTCCCTGGCCAACCACGCTGCTCCTGACATACACAAAAACC
TGGAAGCGGTTGGCAAAGCAAGCTTTCTAGACCAT

FMO05026.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG15434-RA 460 CG15434-RA 104..388 33..317 1425 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:19
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4454885..4454995 128..238 555 100 Plus
2L 23513712 2L 4454729..4454827 33..131 495 100 Plus
2L 23513712 2L 4455055..4455135 237..317 405 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:33:20 has no hits.

FMO05026.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:57 Download gff for FMO05026.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15434-RA 104..396 33..325 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:29:23 Download gff for FMO05026.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15434-RA 65..357 33..325 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:21:07 Download gff for FMO05026.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15434-RA 104..396 33..325 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:21:07 Download gff for FMO05026.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 4454719..4454826 27..130 94 -> Plus
2L 4454888..4454994 131..237 100 -> Plus
2L 4455056..4455143 238..325 95   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:57 Download gff for FMO05026.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4454719..4454826 27..130 94 -> Plus
arm_2L 4454888..4454994 131..237 100 -> Plus
arm_2L 4455056..4455143 238..325 95   Plus