FMO05027.5prime Sequence
369 bp (369 high quality bases) assembled on 2008-08-11
> FMO05027.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGCCCAGCTCCACTTT
GACGTCCTCTACTGCTCTTCCGGTGAAGCAACGAAATGGATTTGATCTTG
GACTCGAACCGTTGCGGATCTTAGGAGCCTGCAACTGGTCCGGTAAGCTG
ACCTTTTTGATGCAGTGGAAGGGTTGCGACGAAGCCGGCCTGGTGCCCGC
CGAAGTGCTCAACGTTCGGTGCCCCCAAATGGTCATCTCGTTCTACGAGG
AGCGTATTGTGTTCACGGATGAGGGCGATGAAGAAGACTTGGAGTCGGAC
AATGGGTATGAGACCACTCCGAGTCCCAGGAAGAAACGATCACGAAATGC
CGCAAGCTTTCTAGACCAT
FMO05027.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HP6-RA | 500 | CG15636-RA | 116..433 | 34..351 | 1590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4577786..4578103 | 351..34 | 1590 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:34:49 has no hits.
FMO05027.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:52:55 Download gff for
FMO05027.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HP6-RA | 99..416 | 34..351 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:18:25 Download gff for
FMO05027.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Umbrea-RA | 1..321 | 34..352 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:16 Download gff for
FMO05027.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HP6-RA | 116..433 | 34..351 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:16 Download gff for
FMO05027.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4577786..4578103 | 34..351 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:52:55 Download gff for
FMO05027.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4577786..4578103 | 34..351 | 100 | | Minus |
