Clone FMO05028 Report

Search the DGRC for FMO05028

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:50
Well:28
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO05028.5prime Sequence

403 bp (403 high quality bases) assembled on 2008-08-11

> FMO05028.5prime
TAGCATACATTATACGAAGTTATCAGTCGACATGGCTGATAGTGCGCTCA
TCGAAAACGAGTTGGTTGCCCGGCCCGATAAGCTGTACTGCCTGAATGCG
CCGGAAAGCCGTTTCGACGAGAACCATATCAAGGATGGCCAACCCACGAC
CATGGCTAATCTGGAGCGCTGCAACTGGAGGCGGGTGCACGTGGACTGCC
AGCTAAAGATGCCGCTGCGTGCCGAGATTCCGGTAGGCCATGCTAGCGCC
TACGGTCCAGTTCTGTGCGGCACCATCCTGCTAGGTTGGTCTCTGGCCCT
GTGGACCATCATCCACTCGATGGCCAACACGCGACGCATCAATCAGCGCC
TCAACGAGCAGCGACTTCTGCAGCAAAAAGTCAAGGCAAGCTTTCTAGAC
CAT

FMO05028.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG30381-RC 1195 CG30381-RC 516..869 32..385 1770 100 Plus
CG30381-RB 1177 CG30381-RB 498..851 32..385 1770 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:43
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7929984..7930337 385..32 1770 100 Minus
Blast to na_te.dros performed on 2014-11-28 20:07:44 has no hits.

FMO05028.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:27 Download gff for FMO05028.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30381-RB 496..854 28..389 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:11 Download gff for FMO05028.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30381-RB 356..714 28..389 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:01 Download gff for FMO05028.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30381-RB 496..854 28..389 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:01 Download gff for FMO05028.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 7929981..7930339 28..389 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:27 Download gff for FMO05028.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3817486..3817844 28..389 98   Minus