FMO05029.5prime Sequence
398 bp (398 high quality bases) assembled on 2008-08-11
> FMO05029.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGCAGGAGGCG
GGACAGTATCCGCCCATCGAGTCTGCCATGCGAAAAGCACTAAACACGGA
GCTGAAGCCGGTATATCTGGAGGTCATTAACGAATCGCCCCAGCACAATG
TCCCCAAGCGGTCGGAGTCCCACTTCCGTGTGTTCGTCGTCTCGGAGAAG
TTCAACGATCTGACGCTCATCAAGCGTCATCGATTGGTTAATGACACGGT
AAAAAATGCGCTGAAGGAAGCAGGCTTCGAGTTTATGCACGCCCTGTCCA
TTGAGGCCAAGACACCCAAGCAGTGGGAACCGGAGCAGGAGCCGGAGAAG
AGTCCGCCGTGCCTGGGAGGCCACGGCAAGGCAAGCTTTCTAGACCAT
FMO05029.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31126-RA | 589 | CG31126-RA | 146..490 | 36..380 | 1725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24659766..24659954 | 36..224 | 945 | 100 | Plus |
| 3R | 32079331 | 3R | 24660009..24660166 | 223..380 | 790 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:39:37 has no hits.
FMO05029.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:50 Download gff for
FMO05029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31126-RA | 139..493 | 29..384 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:12 Download gff for
FMO05029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31126-RA | 129..483 | 29..384 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:21:40 Download gff for
FMO05029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31126-RA | 139..493 | 29..384 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:21:40 Download gff for
FMO05029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24659759..24659954 | 29..224 | 98 | -> | Plus |
| 3R | 24660011..24660169 | 225..384 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:50 Download gff for
FMO05029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20485481..20485676 | 29..224 | 98 | -> | Plus |
| arm_3R | 20485733..20485891 | 225..384 | 98 | | Plus |
