FMO05033.5prime Sequence
438 bp (438 high quality bases) assembled on 2008-08-11
> FMO05033.5prime
CCTAAAACGAAGTTATCAGTCGACATGTCGCAAACAGATCTGAACAAAAG
TATTGAGATAATAACCAAGACCGAGGAGTTGGCCGACAAAATTCTGGTCA
ACAAGCAGGAACTGACGGTAATGGATAAACGCCGCCAAGAAACCCGGCAG
GCAATGCGGCTGATGGAGAAGTCGGAGGACAAGAAAGTTTGGATCACTAT
TGGCAGTATGCTAGTCAAAATGGAGCGGGAAAAGGCATTGGAACTGCTCA
AAAAAGATCAACAGAAAATAGAACAGCAAATCAATCTGATATACTCAGAT
CAGAAAGTTCTGGTGAACAAACATCGCGATTTGGAGTTCAAATCGCCCTT
CTCGGGTACACATCTTAAGCCCTTAGAAAAGAAGGAGTTCGACGCTCTGA
AAGCAAATCTCCCATTACTGGCAAGCTTTCTAGACCAT
FMO05033.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15863-RA | 562 | CG15863-RA | 58..453 | 25..420 | 1980 | 100 | Plus |
| Pal1-RA | 2621 | CG12130-RA | 1..86 | 151..66 | 430 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9959444..9959675 | 256..25 | 1160 | 100 | Minus |
| 2R | 25286936 | 2R | 9959228..9959393 | 420..255 | 830 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:58:50 has no hits.
FMO05033.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:29 Download gff for
FMO05033.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15863-RA | 58..463 | 25..428 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:48 Download gff for
FMO05033.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15863-RA | 1..399 | 25..423 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:46:07 Download gff for
FMO05033.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15863-RA | 58..463 | 25..428 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:46:07 Download gff for
FMO05033.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9959218..9959391 | 257..428 | 97 | <- | Minus |
| 2R | 9959444..9959675 | 25..256 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:29 Download gff for
FMO05033.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5846723..5846896 | 257..428 | 97 | <- | Minus |
| arm_2R | 5846949..5847180 | 25..256 | 100 | | Minus |
