FMO05034.5prime Sequence
397 bp (397 high quality bases) assembled on 2008-08-11
> FMO05034.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGTCGTGGG
TTGTCTCCACCACCGAGCTGCGCGATTGTGGTACCAAAGGCTCCAAAGCC
TCATCCACCTCGTCGCGGCACACGCGTCTGATCCTGCTGGTGTGGCAGAA
TCTCGCCGAGAAGTGCCACAAATTCGGAAGTTTTCTCCGGCGTGAAACGA
ATAAACCGCTGCCCAAAGAACTGAGGCGATCGTTACGTCTTAACAAATCG
GCCCGCCGGAAAGGCTATCGGAGTTGCGAGAGCGAAGCAGAAAAACGGCT
GATGACAGAGCGTTTAAACGAACCCATCAACATCTCCATTCGCATGGGAC
CTGCCTATGACTATAGGCCATCGAATTTCGCAAGCTTTCTAGACCAT
FMO05034.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:12:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18577-RA | 810 | CG18577-RA | 15..356 | 38..379 | 1710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:12:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11196106..11196366 | 38..298 | 1305 | 100 | Plus |
| 3R | 32079331 | 3R | 11196749..11196831 | 297..379 | 415 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:12:09 has no hits.
FMO05034.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:58 Download gff for
FMO05034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18577-RA | 9..356 | 32..379 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:29:21 Download gff for
FMO05034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18577-RA | 1..342 | 38..379 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:47 Download gff for
FMO05034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18577-RA | 9..356 | 32..379 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:47 Download gff for
FMO05034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11196100..11196365 | 32..297 | 99 | -> | Plus |
| 3R | 11196750..11196836 | 298..385 | 95 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:58 Download gff for
FMO05034.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7021822..7022087 | 32..297 | 99 | -> | Plus |
| arm_3R | 7022472..7022558 | 298..385 | 95 | -> | Plus |
