FMO05038.5prime Sequence
600 bp (600 high quality bases) assembled on 2008-08-11
> FMO05038.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGAAGCCGAC
AACCCTAAAGGACGCATTGGCCAAGTGGGAGGACCGCAATAAGCAGCCAG
CCGCCACTGCCACGGAAATTGGACTTCAGTTTCAGTATCCGCCGATCGAG
AAAATGGATCCGATTCTCAATTCCCTTACCGAGTGCCAAAAGCTCAGCTT
GTCCTCAAATATGATTGAGAAGATTACTGGAATTTCGGGAATGAAGAACC
TGAAAGTCCTGAGCCTGGCACGTAACAATCTTAAAACGCTCAACGGCATA
GAACCACTGGCCGATACTCTGGAGGAATTGTGGGTCAGCTACAACAACAT
CGAGAAGACCAAGCCCCTGGAATCGATGAAGGCCCTGCGTGTGTTTTACA
TATCCTTTAATATGATCAAGGACTGGACGGAGTTCATGCGCATGGGTGTT
CCACCAAATCTCAGCGAGATCACATTTGTGGGAAATCCTTTGAACGAGAA
CATGGACCAGTCTGCCTTCACTGCCGAGGCAGTCCGTCGTCTGCCCAACA
TGAAGAAACTCGATGGGGAGCCTGTCATTCGTGCAAGCTTTCTAGACCAT
FMO05038.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10839-RB | 1300 | CG10839-RB | 86..632 | 36..582 | 2735 | 100 | Plus |
| CG10839-RC | 1023 | CG10839-RC | 86..632 | 36..582 | 2735 | 100 | Plus |
| CG10839-RA | 692 | CG10839-RA | 86..632 | 36..582 | 2735 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15979571..15980117 | 36..582 | 2735 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:58:53 has no hits.
FMO05038.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:30 Download gff for
FMO05038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10839-RA | 78..632 | 28..582 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:29:19 Download gff for
FMO05038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10839-RA | 29..583 | 28..582 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:46:08 Download gff for
FMO05038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10839-RA | 78..632 | 28..582 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:46:08 Download gff for
FMO05038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15979563..15980121 | 28..587 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:30 Download gff for
FMO05038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15979563..15980121 | 28..587 | 98 | <- | Plus |
