FMO05044.5prime Sequence
622 bp (622 high quality bases) assembled on 2008-08-11
> FMO05044.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGCCGTTGC
TTCCACTGGCATCGCTAATCATCTTGGCCAATTTGGTGGCATCTCGACCC
TATTCCTATGGTCCACGGGCAGAAGCGCCTCCCACGAGATTGGCCAACCG
GATTGTGGTGCAGTCACCCTCGCTGGACAACTTGTATATGGACTACGTGG
TCACATCGAAGCCGCTGAATCTGCGCAAGTACAACAAGAACGGCAGTAAG
ACGAAAAAAACGAAAAAGGATTCGAAAATATATTACATACCCGTACCCCC
ACTGCCCTTCCGCCACATACCTGGCATCGGCTTGGATTATCAGCCGATGA
AAATCAATCCCATCCTTCACGAGTCGGAGAGCACAACGAGAAAGACCACA
ACGGTTCGCCCACCGACGACGACGACATCTAGCCCCAATCTGGATCATCG
GAATCCGAGCAAAGTACTTCGAGTGCAACACCTCAAGGATTACTACTTCA
ATGGGCGCCCACATCGACTGCAGGTTGCCCATGCTGATAAAAAGTCCGGT
CTGACGGCCCTTAACCTGAAGTCCAACTTTTATTATAACAAAAACATTAT
TTATGCAAGCTTTCTAGACCAT
FMO05044.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:57:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13856-RA | 943 | CG13856-RA | 331..897 | 38..604 | 2835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:57:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22404447..22405013 | 38..604 | 2835 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:57:55 has no hits.
FMO05044.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:49 Download gff for
FMO05044.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13856-RA | 331..897 | 38..604 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:16 Download gff for
FMO05044.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13856-RA | 331..897 | 38..604 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:08 Download gff for
FMO05044.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13856-RA | 331..897 | 38..604 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:08 Download gff for
FMO05044.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22404442..22405013 | 29..604 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:49 Download gff for
FMO05044.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18230164..18230735 | 29..604 | 99 | | Plus |
