FMO05050.5prime Sequence
288 bp (288 high quality bases) assembled on 2008-08-11
> FMO05050.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTTCACCGAAAC
CGCTCTTGTTTCCAACTTCAATGGAGTGACAGAGAAGAAATCTCTTACCG
GCGCCTCCACCAACCTGAAGAAGCTGCTGAAGACCATCAAGAAGGTCTTC
AAGAACTCCAAGCCTTCGAAGGAGATTCCGATCCCCAACATCATCTACTC
TTGCAATACTGAGGAGGAGCACCAGAATTGGCTCAACGAACAACTGGAGG
CCATGGCAATCCATCTTCACGCAAGCTTTCTAGACCAT
FMO05050.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BobA-RA | 627 | CG12487-RA | 58..291 | 37..270 | 1170 | 100 | Plus |
| CG13465-RA | 602 | CG13465-RA | 40..273 | 37..270 | 1125 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14945835..14946068 | 270..37 | 1170 | 100 | Minus |
| 3L | 28110227 | 3L | 14944059..14944292 | 270..37 | 1125 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:26:12 has no hits.
FMO05050.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:04 Download gff for
FMO05050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BobA-RA | 58..297 | 37..278 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:52 Download gff for
FMO05050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BobA-RA | 45..284 | 37..278 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:07 Download gff for
FMO05050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| BobA-RA | 58..297 | 37..278 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:07 Download gff for
FMO05050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14945829..14946068 | 37..278 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:04 Download gff for
FMO05050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14938929..14939168 | 37..278 | 98 | | Minus |
