FMO05053.3prime Sequence
459 bp (-459 high quality bases) assembled on 2008-08-11
> FMO05053.3prime
ATGGTCTAGAAAGCTTGCGGGCTCCATTCCACCAGATTCGGCATCGATCT
TGTGATCGGTATAGATGGGTTGCAATATCTCACGGGCAGCTTCGTGATCA
GCTTTTCCCAGGGCCTGTGATCTTCCATACAGCTTGATGTACTTCTTTTC
CTTGTCGTGAACCAAGTAACCACCTCCAAGACCCTGGGTGCACAAGCCCA
TCGACTCAGCCTCCTTTTTCAACTCATCGTATACATCAAGATGGTACTTG
GCCTTGGAAAGGCTACGAATCACCTGCTTGGCGCTACCCATTTCCCCATG
GATATAAACGTGGGCCATCATGTACTTTGATTTTCCACTTTCCACCTTGG
CAACAGGAAAAGCGACTAGACTTCGCATTGGCTTCTCACAATAAAGTCGA
GCCGCTTGCATCATTGGCCGCCAAACGGGTTTAAGAAATTTTCCAGCAAA
CTCCATGTC
FMO05053.3prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18662-RA | 646 | CG18662-RA | 71..511 | 459..19 | 2205 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8981077..8981297 | 239..19 | 1105 | 100 | Minus |
2L | 23513712 | 2L | 8980853..8981023 | 406..236 | 840 | 99.4 | Minus |
2L | 23513712 | 2L | 8980729..8980783 | 459..405 | 275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:07:50 has no hits.
FMO05053.3prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:31 Download gff for
FMO05053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18662-RA | 71..511 | 19..459 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:17 Download gff for
FMO05053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18662-RA | 50..490 | 19..459 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:03 Download gff for
FMO05053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18662-RA | 71..511 | 19..459 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:03 Download gff for
FMO05053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8981077..8981297 | 19..239 | 100 | | Minus |
2L | 8980855..8981019 | 240..404 | 100 | -> | Minus |
2L | 8980729..8980783 | 405..459 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:31 Download gff for
FMO05053.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8980729..8980783 | 405..459 | 100 | -> | Minus |
arm_2L | 8980855..8981019 | 240..404 | 100 | -> | Minus |
arm_2L | 8981077..8981297 | 19..239 | 100 | | Minus |