FMO05055.5prime Sequence
855 bp (855 high quality bases) assembled on 2008-08-11
> FMO05055.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGATTCTCCAGCT
GGTGCTTATCGTGCAGTTCTCCCTGGTATTTGGCCAGGAGACTGGCTCCC
TGCGAATAATGAATGGCACAGCGGCAAAAGCGAAGCAGTTGCCTTACCAG
GTTGGACTACTTTGCTACTTCGAAGGATCCAAGGATGAGCCCAATATGTG
CGGGGGCACTATCCTCAGTAATCGTTGGATTATAACCGCAGCCCATTGTC
TGCAGGATCCAAAGTCTAATCTCTGGAAAGTGCTGATCCACGTGGGAAAG
GTGAAATCCTTTGATGATAAAGAAATCGTGGTCAACCGGAGCTACACCAT
CGTCCACAAGAAGTTCGACCGTAAGACCGTGACAAACGATATAGCCCTGA
TCAAATTACCCAAGAAGCTTACATTTAACAAGTATATCCAACCCGCCAAG
TTGCCCAGTGCCAAGAAAACATACACGGGTCGCAAAGCCATCATTTCGGG
TTGGGGTCTGACCACCAAGCAGCTGCCCAGCCAGGTGCTCCAGTACATCA
GGGCGCCCATCATCTCGAACAAGGAGTGCGAGAGGCAGTGGAACAAGCAG
CTGGGCGGCAAAAGCAAAAAGGTCGTGCACAACGGCTTCATCTGCATCGA
TTCCAAGAAGGGTCTGCCATGTCGCGGCGACTCCGGAGGTCCGATGGTCT
TGGACGATGGCAGCAGAACCCTGGTGGGAATTGTATCCCACGGATTCGAT
GGCGAGTGCAAGCTAAAACTGCCCGACGTATCCACACGCGTTTCTTCCTA
CCTCAAGTGGATTAAATACTACTCTGGAGGACTTAAGGCAAGCTTTCTAG
ACCAT
FMO05055.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:12:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10469-RA | 1067 | CG10469-RA | 219..1029 | 27..837 | 4010 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:12:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6092226..6092790 | 837..273 | 2825 | 100 | Minus |
| 3L | 28110227 | 3L | 6092850..6093095 | 272..27 | 1185 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:12:02 has no hits.
FMO05055.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:53 Download gff for
FMO05055.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10469-RA | 219..1034 | 27..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:31 Download gff for
FMO05055.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10469-RA | 1..804 | 37..838 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:44 Download gff for
FMO05055.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10469-RA | 219..1034 | 27..845 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:44 Download gff for
FMO05055.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6092850..6093095 | 27..272 | 98 | | Minus |
| 3L | 6092221..6092790 | 273..845 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:53 Download gff for
FMO05055.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6085321..6085890 | 273..845 | 99 | <- | Minus |
| arm_3L | 6085950..6086195 | 27..272 | 98 | | Minus |
