FMO05056.5prime Sequence
861 bp (861 high quality bases) assembled on 2008-08-11
> FMO05056.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCACTCGTGGC
ATATGCCGGAGCCACGCCCACTCCCGGCGATGGGCGGATTGTGGGTGGCG
AGGTGGCCACCATTCAAGAATTTCCCTATCAAGTATCCGTCCAGTTGCAA
GGCCGGCACATATGCGGTGGAGCCATCATTGGCATCGACACCGTACTGAC
AGCGGCCCATTGCTTCGAGGATCCCTGGAGCAGTGCAGATTACACAGTGC
GAGTGGGTTCCAGCGAGCATGAGAGTGGGGGCCATGTGCTCAGCCTGCGG
CGAGTCATCGCCCACGGCGATTATAATCCCCAGAGCCACGACAACGACCT
GGCGTTGCTCATCTTGAATGGCCAGCTCAATTTCACCGAGCACCTGCAGC
CAGTGCCACTGGCCGCATTAGCGGACCCACCCACCGCGGACACCCGTCTC
CAGGTCAGCGGTTGGGGTTTCCAGGCCGAGGAGAGTGCAGTCAGCGGTGA
AGTTGGAGTGTCTCCGCAACTTCGTTTCGTGGACGTGGATCTGGTGGAGT
CGAATCAGTGCCGGCGTGCCTATAGCCAGGTGTTGCCCATAACCCGGCGG
ATGATCTGTGCCGCGCGTCCAGGTCGGGATAGTTGCCAGGGCGACTCTGG
CGGACCACTGGTGGGTTACGCAGCGGAAGAAGGTCCGGCCAGGCTATATG
GCATCGTTTCCTGGGGCCTGGGCTGCGCAAATCCCAACTTTCCAGGAGTG
TACACCAATGTGGCTGCCTTCCGCAGCTGGATAGATGAGCAGTTGGACGC
CAGGGGATGGGATGAACTGCTGGCGGGCTGGAGTAGATTGCAAGCAAGCT
TTCTAGACCAT
FMO05056.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11192-RB | 960 | CG11192-RB | 45..851 | 37..843 | 4035 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20354217..20355023 | 843..37 | 4035 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:58:03 has no hits.
FMO05056.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:56 Download gff for
FMO05056.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11192-RB | 45..854 | 37..847 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:32 Download gff for
FMO05056.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11192-RB | 31..840 | 37..847 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:13 Download gff for
FMO05056.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11192-RB | 45..854 | 37..847 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:13 Download gff for
FMO05056.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20354214..20355023 | 37..847 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:56 Download gff for
FMO05056.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16241719..16242528 | 37..847 | 99 | | Minus |
