FMO05060.5prime Sequence
855 bp (855 high quality bases) assembled on 2008-08-11
> FMO05060.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGACACGGCGTCGA
CGTCCACGATGTAAGGTGAATCCCTCGATAGCGCTGAGAAAGAAGAAACA
GGAGACTGCACCCAGTGCAGAAAAGGTAGAGCCACAACGTCCACCGCCCT
TGCCGGATCCGCCCAGCGAAGAGCCACCGGAAGTCGTCAGCACTTCGAGC
GTAGAATCTGAAATCGAATCGGATTACAAACTCTTCCCGGAACTCTACGA
TCGCCAGCCGTCGATGCCCACGTTTGCTGATCTTTTTGGTCAGCCCTCTT
ATGAATCAGTGTTGCAGGAGCCCGAGGTGGCATCTACCTCCTCCTCAACG
AACACAAATGCCGCGGGAATACGTAGTACAGACGATGGGAAATTCACTAA
TATTCCGGCCACGATGCTGTCAGATCAATTTGGGATCATTGGGCTGCTGG
CCGCCATGAGGACTACGCAAACGGATCCGGGCGCCACGCAGCTGGTCTTT
GGTGAGGATCTAACCACCTACGGACTAGATTTGGCTGCCCAGGGAGACAT
TTATGTGCATTTCAATGGGCCTCTAACCCGCGAACCACCTGACAGAAATT
CCATGGACTGCGCCCTTGAGATGGGAATGCGTGCCATGCGTGATTCGATT
ATCAATGAACCACCGAAGGCTCCGTGTTGGGATCCATTTGAGCCAGAGAC
CCAAGATCTGGGACTTGTGGGCAGTCTTGAACCGGATGAGTTTACGAAAT
CCGATCCAGATACGGAAACGGATCCACCGCCAACTACTGATTTGACTGAA
GATCCGGAAACGGATCGAGATGATAATCAGTATAGAGCAAGCTTTTCTAG
ACCAT
FMO05060.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6576-RA | 1179 | CG6576-RA | 195..995 | 36..836 | 4005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8756183..8756983 | 36..836 | 4005 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 19:16:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gypsy4 | 6852 | gypsy4 GYPSY4 6852bp | 2638..2697 | 764..705 | 111 | 65 | Minus |
FMO05060.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:54 Download gff for
FMO05060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6576-RA | 195..998 | 36..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:16 Download gff for
FMO05060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6576-RA | 195..998 | 36..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:53 Download gff for
FMO05060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6576-RA | 195..998 | 36..840 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:53 Download gff for
FMO05060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8756183..8756986 | 36..840 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:54 Download gff for
FMO05060.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8749283..8750086 | 36..840 | 99 | | Plus |
