FMO05062.5prime Sequence
908 bp (908 high quality bases) assembled on 2008-08-11
> FMO05062.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTTATCGCCG
CTTTTCCTGCTGCCCCTCTTGGCTTTGGCCGGAGCGGCTAAACTTCCGCA
CATTCAACACCTGACATTGAGGGATACAGAACAAGTTCACGCAGAGATCC
AGCCCCTGATTATAGATGGCTACGATGTGCAGGGGGTGGACAATGTGCCC
TACCTGGTGTCCCTGTCCTTGACAAGGGCCACCTATACCCACTTGTGCGG
GGCATCCATCATTGGCAAACGATGGCTCCTGACGGCTGCTCATTGTGTCG
ATGAACTGCGCACCTTCAACGGAGATGCCGTAGGAACACCCGTTTACGCT
GGAATCATCAACCGGTCGAACGTGACGGCCGCCCAAGTGCGCTACGTCGA
CTTCGCCTCAACGCATCGGTCTTTCAATGGAAACGCCGGAAGTGACAATA
TAGCCTTGCTCCACGTCTCTGAGAGCTTCGAGTACAACGCTCGAGTTCAG
CAGATCGCCCTGCCCGACATCAATGATGATTACAGCAATAAGACAGCTGC
TGCTTATGGCTGGGGACTCACCGACCCCGATGGCGACGAGTACTCCAAAG
AGTTGCAGTATGCCTTCGCTCCCCTACTCAATAGCACGGGTTGCAAGGAG
TTGCTGCCCGCAGACGCTCCTCTGACGGCGCAGCAGGTGTGCTCTCAGGT
AAAGACCTGCTACGGAGACGGAGGCACTCCCCTGATCTACTGGCCCATCA
CTGGACCGGCGGAGTTGGTGGGCCTCGGATCCTGTAGCTATATGCCGTGC
GGATATGCCAATCGGCCAACGGTGTACACCTCTGTACCCCCTTACATTGG
ATGGATCCACCAAACGATCGGCGCCTACTACCAGCTTAACGCAAGCTTTC
TAGACCAT
FMO05062.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:34:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33127-RA | 991 | CG33127-RA | 31..882 | 39..890 | 4245 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:34:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 322131..322982 | 39..890 | 4245 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:34:25 has no hits.
FMO05062.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:58 Download gff for
FMO05062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33127-RA | 23..882 | 28..890 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:33 Download gff for
FMO05062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33127-RA | 1..855 | 39..893 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:36 Download gff for
FMO05062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33127-RA | 23..882 | 28..890 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:36 Download gff for
FMO05062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 322121..322982 | 25..890 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:58 Download gff for
FMO05062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 322121..322982 | 25..890 | 99 | | Plus |
