FMO05063.5prime Sequence
946 bp (946 high quality bases) assembled on 2008-08-11
> FMO05063.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCAGAAGCGG
CAAATGTGCGCCAGAACCTTCAAAATGTGCCGTCGATCTTCGAAATTTCA
GCGTCAGAGACGCTGGACAACCTGATTTACCCGGCACTGAGCAAGATATT
CGACTACTTTGGACTACGCCTGGACTTTAAACTATGGGGGAGTTTGAGGA
TTCAGGAGGAGCTGTCGCCATTGCTGACTTGGCTGCTGCAGTACCTGTAT
CTGCGCAAGAGGGCCTCCTCTTTCGGTGAGAGCTTTTACGGATTGCAAAG
GACGGTCACAACCACTGGGGATCTGCTGAACCGCAGGCAGCAGTTCGCCT
CTGCCACACTGCTAACCTTCATGCCTTACGTGGAGCGGAAGCTAAGGACC
AGGATCACCAGGCACGAGGACACCAGTCCCTGGGAGCAACGCCTTCTAAG
CGCATTCCATGCTTTCCATGCCGCCAAGGCGGCGCACACATTCTTTTACC
TCGTAAAGTACGCCTCAAACCACTCGCCCATCTTCAGATTGTTGGGGCTG
ACCCTTCGCTATCCCAGCGAACCTCCCAAAGAGGATCAGTGGACCTACGT
GGTCCTAAAGATGCTGGAGGTCTTGGCCTTCTTCCTGCAGTTCGTCCAGT
GGTGGTACTCCAACGACCAGCGGCGGAAAGTGGGTGGAACTCTGATAAAT
CCCGAAGCGATGCCGAGAAAGCAGCTGCCCAAGGAAGTGCAGCAGAGCCT
TCCCCAGCGGGGAGAGTGCCCAGTCTGCCTGCTGTCCATCCAGACGCCCA
CTGCCTGCTCCGTTTCCGGCTACGTCTTTTGCTGGAAGTGCATCGTTAGC
CACATGAAGGAGCACGGCACCTGCCCGGTCACCCACTATCCCATCAGTCT
GGACGACCTGGTGCGCATCTACGAGACGGCAAGCTTTCTAGACCAT
FMO05063.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pex12-RB | 2104 | CG3639-RB | 91..981 | 38..928 | 4455 | 100 | Plus |
| Pex12-RA | 1040 | CG3639-RA | 91..981 | 38..928 | 4455 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 816083..816973 | 38..928 | 4455 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:09:57 has no hits.
FMO05063.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:14 Download gff for
FMO05063.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex12-RA | 87..988 | 30..937 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:53 Download gff for
FMO05063.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3639-RA | 1..894 | 38..932 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:12 Download gff for
FMO05063.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex12-RA | 87..988 | 30..937 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:12 Download gff for
FMO05063.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 816079..816980 | 30..937 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:14 Download gff for
FMO05063.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 816079..816980 | 30..937 | 99 | | Plus |
