FMO05072.5prime Sequence
792 bp (792 high quality bases) assembled on 2008-08-11
> FMO05072.5prime
ATTATACGAAGTTATCAGTCGACATGGAGCTAACTCTCGCCCTCGTCCTG
CTGTTCGGATGTGCGTCCACCTACGGACACGCCTCCGATTTCCCCTCGGG
CATCGAGAGGTGCGCCATAATGGACGAGCAGTGCCTGGAGGACAGGGTGA
ACTTCGTGCTCAGGAACTACGCCAAAAGCGGTATCAAGGAGCTGGGCTTG
ATCCCCCTCGATCCGCTGCACGTCAAGAAGTTCAAAATCGGACGCAATCC
GCACAGTCCGGTCAACATCGATCTCAGCTTCCACGAGATGGACATCTTGG
GTCTGCATCAGGGAGTTGCGAAGCGAGTGAGCGGATTCACAAGGGATCTC
AGCCGCTCCATCGAGCTGGTCATGGAAGTTCCAGAAATAGGAGTCAGAGG
ACCCTACTCGGTGGACGGAAGAATACTCATTCTGCCCATCACCGGAAATG
GCATTGCTGACATACGCCTCACTAGAACAAAGGTACGTGCACAGATCAAA
TTGAAGCGCGTCTCCAAGGGCGATCATCAAACCTACGCCGAGGTGATGAA
CATAAAGGTTGAGCTGGATCCATCCCATGTGACCTACCAGCTGGAAAATC
TGTTCAACGGCCAGAAAGATCTCAGCGAGAACATGCACGCGCTTATCAAT
GAGAACTGGAAGGACATCTTCAATGAACTGAAACCGGGCATTGGCGAGGC
CTTTCGGACTGATAGCCAAGTCGGTGGTGGACAGGATCTTTGGCAAACTG
CCGCTCGAACAGCTCTTTGTAGTCGCAAGCTTTCTAGACCAT
FMO05072.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11854-RB | 1039 | CG11854-RB | 39..788 | 24..774 | 3730 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25242710..25243011 | 472..774 | 1465 | 99.7 | Plus |
3R | 32079331 | 3R | 25242204..25242441 | 94..331 | 1190 | 100 | Plus |
3R | 32079331 | 3R | 25242506..25242647 | 330..471 | 710 | 100 | Plus |
3R | 32079331 | 3R | 25242058..25242127 | 24..93 | 350 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:25:48 has no hits.
FMO05072.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:55 Download gff for
FMO05072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11854-RB | 31..797 | 16..783 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:19 Download gff for
FMO05072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11854-RA | 2..768 | 16..783 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:50 Download gff for
FMO05072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11854-RB | 31..797 | 16..783 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:50 Download gff for
FMO05072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25242710..25243020 | 472..783 | 98 | | Plus |
3R | 25242050..25242127 | 16..93 | 94 | -> | Plus |
3R | 25242204..25242441 | 94..331 | 100 | -> | Plus |
3R | 25242508..25242647 | 332..471 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:55 Download gff for
FMO05072.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21067772..21067849 | 16..93 | 94 | -> | Plus |
arm_3R | 21067926..21068163 | 94..331 | 100 | -> | Plus |
arm_3R | 21068230..21068369 | 332..471 | 100 | -> | Plus |
arm_3R | 21068432..21068742 | 472..783 | 98 | | Plus |