Clone FMO05073 Report

Search the DGRC for FMO05073

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:50
Well:73
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13857-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO05073.5prime Sequence

658 bp (658 high quality bases) assembled on 2008-08-11

> FMO05073.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGGTAACCAC
ATGTGGAGCATCATACTAATGCTGCTGGTGCTGGAGCAACTAGTGGCCGA
CTCTGTGGCAGCCAATCTAGCCCAGCTGGTGAAGAAGCAGAGCCAACAGA
AGCAGTTGCAATCCTCGCAGCCAGGACTGCAGGTGGGACAACAACAGTCG
CAGGGACAGCAGATCCACACGCAGCAGTATGTCCAAGACACATTGGGCGA
GCAGCAGGATCTAAAGTCGGAGGACGAGGAGGAACACGATCCCTACCAGA
TGATGCAGGAGTCGAAACAGGAGTCGCGATTGCCCAACTCTGCCAACTAT
CCCTGGAGTCCATATGCCGCACCTCAGGGCAATCCTTACGATGCCATGCC
CAAGATGCTTCCCTTCATTGGCTATGCCCAGCCAGTGCTCATACCCGTCC
CACTCTACCTGGCTCCGGATATGTTCTATCCCGCCTTTTCTGGCGCCAGC
AACGATCTCGAGGATGTGGTGATGTCACGAGCCTCCGGTGGTCGGCGTCC
TGGGGCCAATCACGCGTCATCAGCCCGCAATTCGCCCATCTACTACGTAA
GACTGCCGCCCACACCGTATATGTTTTTGCCCAATATGCCAACGGCTCCA
TTTGGGGG

FMO05073.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:18:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG13857-RA 1435 CG13857-RA 106..725 39..658 3100 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:18:20
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22392899..22393518 658..39 3100 100 Minus
Blast to na_te.dros performed on 2014-11-28 22:18:21 has no hits.

FMO05073.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:05 Download gff for FMO05073.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13857-RA 102..725 34..658 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:18:29 Download gff for FMO05073.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13857-RA 102..725 34..658 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:10:45 Download gff for FMO05073.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13857-RA 102..725 34..658 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:10:45 Download gff for FMO05073.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 22392899..22393522 34..658 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:05 Download gff for FMO05073.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18218621..18219244 34..658 99   Minus