FMO05075.5prime Sequence
999 bp (999 high quality bases) assembled on 2008-08-11
> FMO05075.5prime
CGTATAGCATACATTATATTCGAGTTATCAGTCGACATGGATACTCTGTC
ACCCAATAATGGCTCTAAGTCGAGCTCCAGCGGCAGTTCGGCGGCCAGTT
CCTCCATGGATCTCGGCAAGCAGCAGCAGAAGGAGAAGTTTCATCGTCAC
CCAAGGAATGGGCCCAAGAAGCTTTCCCGCTCCAGGAGTTTGCTGCAATT
GCTCAGCAGGCACCTGGGCAGGCACTTCCACCACCAGAACCAGCAGAACG
ACACGGTCTACAGCAGCCAGGATGATATTAGGAGCAGCTCAACGGATTCC
TTCAGCTTGAGCTACGAGCGTGGCAGCCACGAGTGCCCTATCAATGGTTC
CTCCCTGGACCTGGAGCACACATCCCGGACCTCGAGCGGATCGGCCTGCT
CCAGATACTCGCCCGGTCTGGATTACTACGATCAGCAGGGACACATCTAT
GTGGAGGCTGTCTACAGACCCGGCAGTGCCATGGAGCAACTGCATCCGCA
GCTGCACTTCGAGGAAGACACCAGCGAGGAGGGTAGCAGCAACGAGGCGG
AGGACGAGGTGGAGCTGCGCCACGACGAGAACGAGAACGAGAACAGCAAG
CCTCGATCCGCATCAGCCGCTTCCGCCAAGTCATCGGGACTGCATCTCAG
CCGAATTTCCATCTCCTCCTCGGTGAGCCGCATCCTGCATCACTTCTCCA
GTCCGACGGGAAATGCATCGATGCGCTCGTTGTCCTGCAGCAGCACTCCA
CTGCGTCAGCCCAAGAAATCCCTGTCGCCGAACAACTCGAACAACAGCAG
CAGCAGCAGCTCCAGCTCCAAATTCTCCCGTGCTCCCGCCTCCAAGAAAG
AGGATAAGAAGCAGCAGAGCATCCTGCGACCGCCAGTCCAGTACGTCTAC
ATGAAGGGCATGTCGGGACTGTATTCCGAGTGCCCAGCTATGCGGTCTGC
TTTCCGTATACCCTAACAGCACATGTACGCAAGCTTTCTAGACCATTCG
FMO05075.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:51:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13054-RA | 1340 | CG13054-RA | 156..1098 | 36..978 | 4640 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:51:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16256094..16257036 | 978..36 | 4590 | 99.6 | Minus |
Blast to na_te.dros performed 2014-11-28 18:51:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6740..6822 | 735..820 | 143 | 66.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6868 | 738..889 | 142 | 60.1 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1067..1153 | 735..821 | 137 | 64.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6830..6871 | 780..821 | 129 | 78.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2329..2368 | 781..820 | 119 | 77.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2332..2371 | 781..820 | 119 | 77.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2335..2374 | 781..820 | 119 | 77.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2355..2430 | 735..816 | 116 | 65.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2338..2377 | 781..820 | 110 | 75 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6741..6780 | 781..820 | 110 | 75 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2439..2476 | 783..820 | 109 | 76.3 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 8572..8633 | 767..823 | 109 | 69.4 | Plus |
FMO05075.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:37 Download gff for
FMO05075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13054-RA | 153..1101 | 33..982 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:56 Download gff for
FMO05075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13054-RA | 153..1101 | 33..982 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:59 Download gff for
FMO05075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13054-RA | 153..1101 | 33..982 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:59 Download gff for
FMO05075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16256090..16257039 | 33..982 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:37 Download gff for
FMO05075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16249190..16250139 | 33..982 | 99 | | Minus |
