FMO05076.5prime Sequence
1228 bp (1057 high quality bases) assembled on 2008-08-11
> FMO05076.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGGACCAAGAA
GACGTAGTTGTAAAAAAAGAAAAAAAATGTATAGAAAATATTGATGAGAA
CGACGAAGAGCCCGATGATGTAGATTTTAAGGACAGCGGAAAAATAAGCT
CCTTGAAGGCCCTGGGTCCATTTATAGCCGGCAAGGAGAATAGCCGCAAC
ACGGTTTACCTCAGCGATGTTCCGGATATTTGCAAGGATAAACCGTGCAT
GCTGGGCGTGGACGAAGCAGGGCGTGGTCCCGTCCTGGGACCTATGGTAT
ATGGGATCTCCTACTGTCCACTGGAAAGTAACAAGGCTTTAGAGGACCTG
GGATGCGCCGATTCCAAACAACTAACCGAGGGGAAACGTGATATCATATT
TAACGATATCAACACCAAGGAATATGCGACCAGTTGCGTTGGCTGGGCCG
TGGAGATCATATCGCCGAACACGATCAGCACCAGCATGTACCGGCGGTCG
AAGTGCTCCCTGAACGAAGTTTCCATGGACTCGGCCATGGGCCTTATCCA
ACAGGCGATCGATGCGGGCGTCAATATAGCCGAGGTTTATGTGGATACGG
TGGGTCCGCCGGAGAAGTACCAGGAGAAGTTGCTCAAACGTTTCCCCAGC
TTTAAAATCACCGTGGCGAAAAAAGCTGACTCCACCTATCCAATAGTCTC
TGCTGCTAGTATATGCGCCAAAGTCACCCGTGATCATGCCCTCAAGGTGT
GGAGCTTCCCCGAGGGCTTGGTCATTAAGGATAACGAGTTCGGCAGTGGA
TATCCGGGAGATCCGGTCACAAGAAGATTTCTGACCGAGTACATCGATCT
AGTGTTTGGATTTCCACGACTTGTGCGCTTCAGTTGGTCCACCGCGGAAA
ACGCACTGGCGGACAGGCCTATGACATGGAGTTCGACGAGCCGGATCCGA
GAAGCCCAAGTACGCCGGCACCAGCTCACAAAGGTCTTAAGGCACAACAA
ATCCGGCGAAATAATTCGCGAGGAGTGCGCTTCTTAGCACGCATCTGAAA
GTGTTCATGAGTTGCAGCTTCTAAAACATCGTTGGCGCGCGGCCAGTATG
GTCTAATCTAATCTAATCTAATCTAATTCCAACTAGCTAGGAGATCTTGT
CCTGAACATTGCTGATCCCCAATAAAGTCCGGCGAACCGAGCCTTCGAAA
CTCCAAAGGTGAATCTGATGCCATATCT
FMO05076.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13690-RA | 1219 | CG13690-RA | 53..1083 | 36..1054 | 4805 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 418602..419600 | 1028..36 | 4655 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:16:21 has no hits.
FMO05076.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:01 Download gff for
FMO05076.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13690-RA | 53..1075 | 36..1047 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:05 Download gff for
FMO05076.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13690-RA | 43..1065 | 36..1047 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:01 Download gff for
FMO05076.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13690-RA | 53..1075 | 36..1047 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:01 Download gff for
FMO05076.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 418602..419600 | 36..1028 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:01 Download gff for
FMO05076.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 418602..419600 | 36..1028 | 98 | | Minus |
