FMO05077.5prime Sequence
1040 bp (1006 high quality bases) assembled on 2008-08-11
> FMO05077.5prime
ACATTATACGAAGTTATCAGTCGACATGAACGTTTGGAAAGCAAAGGTCC
TAACGGAGGTCCCATTCGGACACGTCCTCATCGTCAGTGGGCGCGTCAAG
CCTCATCCGAATAAAATTTCGCTGGACCTCACGGACAATGTGAACGCGCA
GAACGAGAGCGAAACGGTGTTCCTGAAGATCGAGGCCAATTTCCGCGAGG
GCCAAATCATCCGCAGCATGTTCCAGCCGGGCGGGGGATGGCAGCAGGAG
GAGATCTCGAAGAACTGGAAGTGCGACGGCCCAAAGAACCCGCTGCAGCC
TGGCCAGAGCTTCACCTTCCGGGTGGCGGTGCTGCAGCGATGCTTCGAGA
TCTACGTGAACGACCAGCTGTACGGGTCCTTCGAGTTCGTCAAGTTCCCC
AAGCAAATCAACTACGTGCGCACCTACGGCGACTTCGAGAAGATCACCCA
GTTCCACCACCGCATGCTCTTTCCGCTCGTCTTCCCCAGAACGCTCATGT
GTCCGGACAAGGTGGCCTTCCAGAGCGACGTGCCCAGGCGGTATGAAACC
GGCACAGTGGTGGCCATGGAGTGCATCGCCAAGGGCCCGCCGACCACGGA
GTTCTCCATCTGCTTCCAGTGCAACGACACCGGGCGTACGGTGCTCCGGT
TCCACGTGAACTTCGATCGGACAACCGTGTCACGCAGCTACCAGCGTGAA
GACAACAGTTTTGCCTTGAGCGACGAGGAGACCGAGGGCGAATTCCCATT
TGTGCGCGGAAAGCTCTTCAAGATCGCTTTTGGGCTCGGGGATCGGGCTT
TCCTGATCGCCGTCAACGGGCAGTACTTCACCTACTACAACTTTCCCGGA
CGCCCCTTCTCCATATCCCACTCTGAAGTTGCTTCACCAACGAAGTGGGC
GACTTCGCCCGTGCGGAGCCTGGAGTACCACTCCCGATTCTCCGCTTCTG
GCCCGGCGTGGAGAAGTTTGTCCATCAATGGCAAGCTTTCTAGACCATTC
GATTTGGCGCCGCCGGGCCCAGGGTAGTGGTTCTTAATCT
FMO05077.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13950-RA | 1073 | CG13950-RA | 13..958 | 26..977 | 4610 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 860764..861357 | 115..708 | 2970 | 100 | Plus |
| 2L | 23513712 | 2L | 861427..861683 | 707..968 | 1060 | 98.1 | Plus |
| 2L | 23513712 | 2L | 860321..860409 | 26..114 | 445 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:38:30 has no hits.
FMO05077.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:26 Download gff for
FMO05077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13950-RA | 6..963 | 19..984 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:18:30 Download gff for
FMO05077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13950-RA | 1..951 | 26..984 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:57 Download gff for
FMO05077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13950-RA | 6..963 | 19..984 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:57 Download gff for
FMO05077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 860314..860409 | 19..114 | 96 | -> | Plus |
| 2L | 860764..861357 | 115..708 | 100 | -> | Plus |
| 2L | 861429..861696 | 709..984 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:26 Download gff for
FMO05077.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 860314..860409 | 19..114 | 96 | -> | Plus |
| arm_2L | 860764..861357 | 115..708 | 100 | -> | Plus |
| arm_2L | 861429..861696 | 709..984 | 96 | | Plus |
