FMO05078.5prime Sequence
1190 bp (1011 high quality bases) assembled on 2008-08-11
> FMO05078.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGTATGGAAT
CCAAGTCGAAGCGGCGGTCCCCTCCAAGCAGTACTCTTGAAGAAGAAGTT
CCTGGAAAGACCATCCACCCTGAGGATCCGAAAATTACATCTAAAAACTT
CGAGAATCCCACAAAAGAAACTTCCATCCAGAGCCCCATTAAGAACTCCA
TAAAACCATCGTGGAATCCAGAACCCAAGATCACTAGGACCTCCATATGG
GACATTGAATCCGCAGGAGGGGATTCAATACAAAATGATTGTCAAAGTGA
ATGTAACGTTGAAGATCAAGGTCATGAGCAAGAGGTCACGTTGGAGACTA
GGATATTTTCTGGAACCTCAGACCGCATTGAACCGCACCGACATTACGGC
GTCTATTTGTTGCGCAACCGCTTCGATGCCATACAATTGCTCACCAGGAA
TACGAGCTCCAGTGCGGATGACTACGGTGAGCGGAGGGTCATTTCGGAAT
ACCGGGAAATGCGATGTGAATTCCGAGTCTGGTCTCCCTTCCAATCCAAA
CTGGCAGCTGGAATAATGGGTGGTGTCAGTGATTTGCATCTGCAAATTGG
CTCAAAGGTCCTATACCTGGGAGCTGGGTTTGGGCGATCGGTATCCCACA
TCTCGGATATAGTGGGTGACTCCGGAATGGTTTATGCTGTGGAGCAGATT
CCTTGGGCTGGTCGTCAGCTGACCATAATGGCCAATCGTCGTTCAAATAT
CGTACCCATAGTCGAGGATGCTACCATGCCATATAAATACCGCTATGAGG
TTCCCGCTTGCATTGACATTATCTTCGCTGATCTTCCGCCTTCGGTTCTG
ATTCGAGCTCTGATGCTAAATGCTAGACACTTCCTGAACCCCGGTGGTCA
CTTCGTGGCCTATTTACATTCGCCTACTAGTCAGGTGTTGTCTTTAATAC
GATTCCTTTGCCGCCGAGAGGAGACTTTTAAGGAGAGCAGCTGGACAAAG
GAAATGTTCTATGAGCCCTTTAGCGGTTACGCTTTGTTGTGGGGCGTGTA
CATCGTAGATGTTTCTGCAGCTTTCTAGACCATCGATGGCCGGCGTCCAG
TAAGTGCCTATCTAATCTATCTATCCTAATCCACTAGCTAGGATCTGCCT
GACATTCTTGATTCCCATAAAGCTCGGGCGTACCGAGGCG
FMO05078.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10909-RA | 1173 | CG10909-RA | 63..1105 | 38..1065 | 4805 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12910285..12911230 | 981..38 | 4600 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:34:11 has no hits.
FMO05078.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:52:42 Download gff for
FMO05078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10909-RA | 60..1105 | 35..1065 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:57 Download gff for
FMO05078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10909-RA | 60..1105 | 35..1065 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:57 Download gff for
FMO05078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10909-RA | 60..1105 | 35..1065 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:57 Download gff for
FMO05078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12910188..12911233 | 35..1065 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:52:42 Download gff for
FMO05078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8735910..8736955 | 35..1065 | 98 | | Minus |
