FMO05079.5prime Sequence
1024 bp (1024 high quality bases) assembled on 2008-08-11
> FMO05079.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAAATTTATTCC
GCTGCACACGACAAACACGGCGATCGTGTACAAGAACTCGCTGTGCTCCT
TTGCCTCGCTTTTGGTCCTGGCCTTCATTGCGCTTTCTGTGATGCTGCCC
GTGCTGCTCGTGTCCTTGCTGAGTCCCTATTCTGGAATATCAGAATCGAG
GGTGCTGTACGAGCAGCCGAATGTCGAGTTCAACTACGAGTACATATTCG
TGGGCACAACGGATCAGGGGGAGTACGAGGAGGAGGAATCCCTGGTCGCT
TGCAGCAGCTTCAGCCAGTTCAATGAGCAAATGGAGAGTTATACGAATAG
CTGCACCACCACTAGATATTGGACAGAGGATGTGGACTACGATGGCGTAA
CAGATCGGGCGCACTTTCAGCTGGAACTGCAGGATGTGCCCACGCGATTG
GTGAGCTTCAATCTGCTGGTCTTCTTTGAAGCTGAACTGCAGCACAAGTG
CGATCTATCGCCTCCGTCCGTGCTGGCCCATCAGTTACAGCTTCCTCTGC
ACGCTCGCCTCAGAAATGGACACGTTCAACTGAAGGGAGAGCTGCAGCTG
AAGCAATACGTAGAGTTCACCTGTCCATTTCCGGGACGCAACATCAAGAC
TCAGTTCCGACAGGTTCAATTGGATACGAACTCTACCAACGGAAATATAG
ATCAGTTCAAGATGGAATCGCTGCTAGCGCAAGTCAAGGCCAATCCAGCA
TATTTCCAGCTGGCCGTGCAGGAGACATACTACAGAGAAACGTCAGCGCG
CTTGCAGCCTGGTCTCATCATTGACCTGGAGCTGGACGTGCTCCAAGTTG
CCGCTCGCTATCATCTTAGCATTTGGGAACGGCTTGACAGTTCTGGCTGT
ACTTCGCCTCCTTCTTCGGCATCTCGTTTTACATAATGACAGCTGATGGA
CTTTCTCTCGACGCCACATCGTTCGCTCCTGGGAGATCATACCGTGAAAA
GCTCTACGCAGCTTTCTAGACCAT
FMO05079.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14020-RB | 1213 | CG14020-RB | 106..1083 | 37..1007 | 4710 | 99.2 | Plus |
| CG14020-RA | 1213 | CG14020-RA | 106..1083 | 37..1007 | 4710 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5517842..5518810 | 37..1000 | 4605 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:14:19 has no hits.
FMO05079.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:53 Download gff for
FMO05079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14020-RA | 99..1083 | 30..1007 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:37 Download gff for
FMO05079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14020-RA | 1..981 | 37..1010 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:59 Download gff for
FMO05079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14020-RA | 99..1083 | 30..1007 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:59 Download gff for
FMO05079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5517842..5518819 | 37..1007 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:53 Download gff for
FMO05079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5517842..5518819 | 37..1007 | 99 | | Plus |
