FMO05080.5prime Sequence
1011 bp (1011 high quality bases) assembled on 2008-08-11
> FMO05080.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCCTTACCAC
CGACTGAATATTTTGGGTCTGTTGATTCTATCTTTGGTCTTGGCCAAGGC
GGATGTGGGCTACCATTACAGCAGACCAACGAGACCCACGGCTCCCTCGG
CACCTTCGGGCGCAGGATCGGTGTATACGGGTCACCAGTTCAGTGCGCTG
CCCACCATCCATCCACTGCCTCCGATTCCGGCACTTCCTCCACTGCCCAC
GGCCAGAGTTCCAATACCCAGGAGTCGTCCCTCAGCTCCGGCTGCCAGCA
TCGTTAGTCATTATCTGCCACCGAAGCCGGTGGTCTCCACATATATTCCA
CCGCCAGCTGCTGCACCCATCTCATCTATAAGTTTCCACGGAACGCCCAC
TTTCAAACCCATCTACGGACCTCCACCGCCGGCAAGGACTTCTCTTGCCA
CGCCCATCGTGGTGCCGCCCACGGGACCAGCTCCACTGACAGCGGGAGGA
AATCTGCGCATTCCCTTCGGCAAGCAGGCGTTGATCTCGCCCGGAGAATC
CTACGTGGCCAATGGCAGGCAGCTGAAGCAATATGCCGTCATCGAGATTA
TTGACAACGACATAGACGAGACCCCGGCTCCATTCCTGTCCGGAACGAGT
TTCTTCGATCGCTATGGAGCACATGTTGGTGCTCCATCCGCCAATGGAAT
CCAGCTGGACTCACGGGCTAATTCCTTGCTGCTGGAGCAGCAGCAGCTTG
CCATCCAGCCCAGATCCCAGGGTGGTGCATCGGGAGGGGATGCCATTGCC
TTGGGATCGGGCGGCCTGGGCTTTGTGCGTTTGCCCAACGGTAATGTGTA
TCTCGGCTCCGGATCCCTGGGCTACATCAGTGGTCAGCAGCGGGTTGGCC
TCCGTTCTGGAGGCACGCACTCGATCGGAATCCACGTCGGATGCCCTGCA
CTTCGGTCATGTCCGCTTGCGGAGTGACAACCTGCTGAGGTCAAGCAGCT
TTCTAAAACAA
FMO05080.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15414-RA | 1402 | CG15414-RA | 241..1195 | 39..991 | 4680 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3480962..3481916 | 991..39 | 4580 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:07:24 has no hits.
FMO05080.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:14 Download gff for
FMO05080.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15414-RA | 234..1203 | 32..998 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:37 Download gff for
FMO05080.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15414-RA | 1..963 | 39..998 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:38:50 Download gff for
FMO05080.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15414-RA | 234..1203 | 32..998 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:38:50 Download gff for
FMO05080.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3480954..3481916 | 39..998 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:14 Download gff for
FMO05080.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3480954..3481916 | 39..998 | 99 | <- | Minus |
