FMO05082.5prime Sequence
603 bp (603 high quality bases) assembled on 2008-08-11
> FMO05082.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCAGCGACCC
TGCCAATTCCAGAGACCAGATCAACATAAACGCGGACGTTTCGGATATTT
CCACTAGCGAGAGTGAGCTAACCAGCGACGACTATACTAGCGATAGCGAA
GATGAGAGCTGCACAGTGGCCGATCCCGACACCAGTCCGCAGACGAGCAT
GTACAGTCTGCTGTCGGCAGAATCAGACAGCGACTTGGAGGAGGAGCAGG
AGAATTTCTGCGAAGAGACTATTTCGCTGCTTGCCCACGAGATCCTCTGC
TGTGAGGGCGACAGTGAGGGCTCAGAGGTAGAGTCCGACGGCGAGGACAT
CGACGAGGCCAGGGAATACGATATGTTTGGAGAATCCTCAGAGTTTGGGC
TTCCTACATACCGGCTCATGCTGAGCGACGAGGACGAAGATAATTCGAAT
GAGGTCGAAGTGGTAGGCAGTAATCCGTTCGTTGGCGAGACAATCTTCCT
GCTAGAAAAGGATAAGGATCAACAGAGCGAGGAGAAGTCCGAGTCAAAGG
AGGAAGAAAAAATCTTCCAAATGGAGCTTTTTGAGGCAAGCTTTCTAGAC
CAT
FMO05082.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1631-RA | 1178 | CG1631-RA | 159..709 | 35..585 | 2755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20327776..20328211 | 150..585 | 2180 | 100 | Plus |
| X | 23542271 | X | 20327602..20327722 | 35..155 | 590 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:33:26 has no hits.
FMO05082.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:01 Download gff for
FMO05082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1631-RA | 147..709 | 23..585 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:18:28 Download gff for
FMO05082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1631-RA | 97..659 | 23..585 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:21:10 Download gff for
FMO05082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1631-RA | 147..709 | 23..585 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:21:10 Download gff for
FMO05082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20327778..20328211 | 152..585 | 100 | | Plus |
| X | 20327590..20327718 | 23..151 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:01 Download gff for
FMO05082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20198617..20198745 | 23..151 | 96 | -> | Plus |
| arm_X | 20198805..20199238 | 152..585 | 100 | | Plus |
