FMO05083.5prime Sequence
838 bp (838 high quality bases) assembled on 2008-08-11
> FMO05083.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGAGGTCTG
GAATAATATATGTTCTTCTGCTGCAAGTGGTGCTTAACTCTGGCAAACCC
CTGCCAGCAGGTGTCTACGATCCGGAGGAGGCAGGTGGATTTGTCGAGGG
TGATATGATGCTAACGGAGGAGCAACAAAGAAATCTGGAGCAGGGTGCTC
CCAAGGCTCGCAATGGCCTTATCAACACGGAAAAGAGATGGCCTGGAAAT
GTGGTGGTCTACAGGATATCAGATGACTTTGACACGGCGCACAAGAAGGC
CATCCAAACTGGCATCGATACCTTGGAGCTGCACACTTGTTTGAGGTTTA
GGGAAGCCACCGATGAGGATAAGGCCTATTTGACGGTTACGGCCAAGTCT
GGAGGATGCTACACTGCCGTCGGCTACCAAGGTGCCCCGCAGGAAATGAA
TCTGGAAATATACCCGCTCGGCGAAGGCTGTTTCCGGCCCGGAACGATCC
TGCATGAGTTTATGCACGCCTTGGGATTCTATCACCAACAGAGCTCGTCC
ATTCGAGATGATTTTATAAACGTGATCTACGAAAACATAGTGCCGGGCAA
GGAATTCAATTTCCAAAAGTATGCCGACACAGTCGTGACCGATTTCGAAG
TTGGTTACGACTACGATAGCTGTCTTCATTATCGACCAGGAGCCTTCTCT
ATCAACGGCGAGGATACTATAGTTCCCCTAGATTCCAGTGCGGTAATTGG
ACAGCGAGTGGGTCTTAGCTCCAAGGACATCGATAAGATCAACATTATGT
ACAAGTGCCCCATTTTGCTGGCAAGCTTTCTAGACCAT
FMO05083.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15255-RB | 1549 | CG15255-RB | 35..817 | 38..820 | 3915 | 100 | Plus |
| CG15255-RA | 988 | CG15255-RA | 35..817 | 38..820 | 3915 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15610903..15611685 | 820..38 | 3915 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:38:06 has no hits.
FMO05083.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:18 Download gff for
FMO05083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15255-RA | 35..817 | 38..820 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:05 Download gff for
FMO05083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15255-RA | 407..1192 | 38..823 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:42 Download gff for
FMO05083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15255-RA | 35..817 | 38..820 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:42 Download gff for
FMO05083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15610903..15611685 | 38..820 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:18 Download gff for
FMO05083.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15610903..15611685 | 38..820 | 100 | | Minus |
