FMO05084.5prime Sequence
930 bp (869 high quality bases) assembled on 2008-08-11
> FMO05084.5prime
ACATTATACGAAGTTATCAGTCGACATGCTGAACGGAAAATTCTACACGG
GCTTGCCGCCCAAAATGGTGGAGCGCCAGGCGGTGAAGGTGTGCAATCGC
CAGGAGTCGCACTTCTTCTGGCCAGACGATTCCCGAGCGGATTCCGCGGT
GGAAACCCGAGCAAAGAGGAGAAACAGCCAGCAGCTGGAGAGGCCTGTGG
AAAGGATTACTTCCAATCAGAATGTATCCGACGAAGTGGACACACGGCGA
ATGTTTCACAAGGAGTTTGCCAGTTCTTCCATACAGTTCTATGATAATCT
GCAGTCTAATCCTGGAAATAAACCTTCATTGGCAAGGGGTCTACGCAGAG
AAATAACCCCAAAACTAACCGAAGTGAGACCGCAGGAATCGGATAACAAA
GCTGAGGACACCAGCAGCCGTCGCCAGCAGGCTTACAGCTCCAAGATCCA
GTTCTACGATTATGTAAACGAAGCAGATAACCTAACTCAAAATAACGCCA
GGAGACCACAAATGGACTTGAATGACAAGCGCGAAGTGGAACTGAATTCC
AAGAACAGTCCCAAGCTGCAGGTCAAAAGAAATGTGCGCAGTTTCAGCGT
GGAACTGGAGCCCAGGTCACCAAGAAACCCCTGAACGACAGTCCCGAGTG
GCGGCGGCCACGCCCACTGCCCCTGCCCAAAAGGATACTGAAGCAAACGT
CACAGATCAGACCCGTACGACCATCTGGAAAGTCGAGTCCGAGATTGCAA
CTAACCCGAAGTCCCGGACTGCCCAAAAAGCATGTGACTCTACAACGAGA
AGGCTGCCGAGTACGCCTACTACGATGATCGGTTGGATCGCGATGATCGG
AAGGATCGCGAGGATCATGAGGAGCCACTACTAAACTCGCTACCGTCAGC
AGTCAATTATGCTGACAGGAAGTCGCCTGC
FMO05084.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15546-RA | 1822 | CG15546-RA | 52..959 | 25..927 | 4250 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30875228..30876135 | 927..25 | 4095 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:25:31 has no hits.
FMO05084.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:47 Download gff for
FMO05084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15546-RA | 42..962 | 16..930 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:35 Download gff for
FMO05084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15546-RA | 1..910 | 26..930 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:40 Download gff for
FMO05084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15546-RA | 42..962 | 16..930 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:40 Download gff for
FMO05084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30875225..30876145 | 16..930 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:47 Download gff for
FMO05084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26700947..26701867 | 16..930 | 97 | | Minus |
