FMO05087.5prime Sequence
1207 bp (838 high quality bases) assembled on 2008-08-11
> FMO05087.5prime
GTTTTTGGCCGTTCTGGCTGTGATTGGCGGTTCCCTGGCCGCTCCTCGTC
CGGATGTCAGCCATCTGGCGGGATACAGCTACCAGGCTGGTGGTTACAAT
GGCAACCTGGTGGCCAATCAGGTGCTCAGTGCTCCCTTGACCACGGTGAC
CACCTCGTACCAGCCCACGGCAGCTGGTACCAACTACTACAGTTCGGCAC
CATCCATTGGTCAGCTTAATCTGGGCTCCTCCGGTTCTTCTGGTGTGGTC
AACTACCAGGTGGGCGGCTCTGGCTCGTCCAGCTATCAAGTGGGCTCCTC
CTCTGTCGGCGGTGGCATCGTGAACGATAACATTGGCCTGGCCGGTCTGC
AGCCCGGACCCACCATCAACTACAACGAGCAGGAGTCGTACATCAGCCAT
CTGGCCAACTTCCAGCCCGCCCAGATCAACAAGCACTTCTACATCCACAG
TGCTCCCGAGGATCACGATGAGCAGCAGATCGTGCGCTATGTGAATGTGG
GCAGGCCCCAGAAGAACTACCGTGTGGTCTTCATCAACGCTCCCACATCC
ACCGCCAGCAAGGCCAAGATCATTGCCCAACGTGGCGCCCGTTTGAGGAG
AAGACTGCCATCTATGTCCTGTCCAAGAAGTCTAATGCCCTGGATGTCAC
CGCCGAGGTGGTCACTCAGCGCCCTGTGGCCAACAAGCCGGAGGTGTTCT
TCGTCAAGTATAAGACTCCTCAAGAGGCGGGCCCATGCCCGGCAGACCAT
TCAGCCAACTATGATTGCCTCTGGGTGGAAGCTCTTGAACCAGCAACGAG
GGTGTGATTCCCGTTTCCTCCGTGATTCGTAGCCTGGGCGATATGGAGCC
TCCCGGAATTGTTGACCGATGCCAACGGTACGTGAACATTGGGGCACCGG
CGGAATTCCAACGTGGGATGCTGGAACCAGCTTTGATGCCAAGGGCAGCC
AGCGCCCGGGTGATCATCACGGGACTACCGGCTCCAATGGCCAGCTTCTA
TCTTGCCCTGAACCGGGGAAGAAGGTAAGCTTTCCAAAAATTCGTTTGCG
CCGCCGGCCCAAGTAAGGTGTCATAAATCATATATCTATTACCAATATCT
ATAACTCCTTTGCCTTAGGAAAATCTCGGGGTCTGAAATGGGTGTTGGAT
ATTCCCACCAAATAAAATAAAGCGCCCGGGGGCACACGAAGGGTCTGAAC
ACATAAT
FMO05087.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlX-RA | 1366 | CG32571-RA | 96..1084 | 3..994 | 4345 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16731254..16732002 | 3..754 | 3580 | 99.3 | Plus |
| X | 23542271 | X | 16732122..16732348 | 769..994 | 535 | 88.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:26:05 has no hits.
FMO05087.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:01 Download gff for
FMO05087.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlX-RA | 94..1072 | 1..982 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:18:31 Download gff for
FMO05087.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlX-RA | 15..993 | 1..982 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:02 Download gff for
FMO05087.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlX-RA | 94..1072 | 1..982 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:02 Download gff for
FMO05087.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16731252..16732003 | 1..754 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:01 Download gff for
FMO05087.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16625285..16626036 | 1..754 | 99 | -> | Plus |
