FMO05089.5prime Sequence
1067 bp (1033 high quality bases) assembled on 2008-08-11
> FMO05089.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGTCTTTTAATGCCAA
CCAAAAATTGCCCTTCCTGGAGGGCAAAGATAGCGACTATTTTCAATCCT
ATTCCCGCCTGGAGACCCACATGAACATGCTCAGGGACTCGGTGCGCATG
CAGGCTTTTCGCGATGCCATCGTCCAGGATGGAGGGCTATTCCAGGACAA
GATCGTGCTGGATGTGGGCTGTGGCACGGGTATACTATCCCTTTTCGCCG
CCGAGGCTGGTGCCAGTAAAGTTATAGCCGTTGAATGCACCGATATAGCG
GATATAGCCGAGGAGATAATAAGGGACAATCAGAAGGAGAATGTGGTGAA
GGTGGTCAAGGGATTGGTGGAGCAAGTGGAGCTGCCCGACGGCATTGAGA
AGGTGGACATCATAGTTTCCGAATGGATGGGAAATGCTCTGTATATGGAG
GCCATGATAAACTCCGTGCTGTTTGCCCGGGATAAGTGGCTCACGCGTGG
TGGGCGAATCCTGCCCAGCACTGGAAACCTCTGGTTAATGGGGGCCTATG
ATCCGCATCGGCGGACTAATCTTAACTTTTGGTGCAACGTGGAGGGCATC
GACATGGGCTGTGTGAGGAAGCCATTCTCCCAGGAGCCCTTGGTGGAGTT
TGTGCCCATCCAGCAGTTGCTCACCGACGAATGCTTCATACACTCCACCA
ACCTGGCTGTGGCCCGCAACCAGCCGGTGGAGTTTCAATCGAACTTTCAA
TTAAAAGTCATGCGAACTGGAATTATCAATATGCTGGTCCTGTACTTCGA
TGTCTTGTTTCCGTCGGGAAAGTCGAACAATCCGTAAGCCTGACCACCTC
GCCGCATTCGCCATGGACGCACTGGGAGCAGACGGTGCTCCATCTGGATG
AGCCACTGTATGTGAGGATTAGGGATCGGGTGCGCGGTGTGCTGGCCATG
ACGCCTACCGGACAGATGGACGTGGCATGACTTTGATCTGCACATCAGCT
TCCGTGGCGAAGAACGCGAGTGAGAGCTTCAAAAGCTCTTCCTCACAGAG
CCAGCTTCTAACAATCG
FMO05089.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:12:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Art6-RA | 1101 | CG9927-RA | 31..1048 | 34..1046 | 4905 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:12:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13944707..13945327 | 1046..431 | 2795 | 98.6 | Minus |
| 3R | 32079331 | 3R | 13945385..13945782 | 431..34 | 1990 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:12:17 has no hits.
FMO05089.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:03 Download gff for
FMO05089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art6-RA | 31..1052 | 34..1050 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:06 Download gff for
FMO05089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art6-RA | 1..1022 | 34..1050 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:50 Download gff for
FMO05089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Art6-RA | 31..1052 | 34..1050 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:50 Download gff for
FMO05089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13944703..13945326 | 432..1050 | 98 | <- | Minus |
| 3R | 13945385..13945782 | 34..431 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:03 Download gff for
FMO05089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9770425..9771048 | 432..1050 | 98 | <- | Minus |
| arm_3R | 9771107..9771504 | 34..431 | 100 | | Minus |
