FMO05091.5prime Sequence
1029 bp (1029 high quality bases) assembled on 2008-08-11
> FMO05091.5prime
ATCCCATTATACGAAGTTATCAGTCGACATGACAAATCGCGAAAAGATCC
ATTCCTTTCAGAACGAAAATTTCGAGGCAAATGCCTGTGGAAATATCTTA
TCGAAGCACAGAATGAAGCGATCAAATCCTGAAGGCCTGTTGGATGATGA
TCCCAATGCTTCTGGTATGGGCTTACCGCCATCGGATCAAAACACCTGCC
AGATGAGCCCCAATCTTGCTGCCCAGAGCCTATCCCCAGCTGTCCCCGTA
TCCTCACTTTCGGACTACTACCAATCAAACTGGCAGCAGCCGCAACAGAT
GGAGTTGCAGAATCAGCAGCCGCACGGATGTGGCTTAGGCAGGATCAACC
AGGGAACACCCAATGCCTACTACGAGCACGATGAGACTGAACAGAGGCGC
CAGGAGCTGCGCAATCTCGTCCAGCATTTGTACGTGGCCCAGGCGAGGGT
CCAACTGGAGGCCACCGAGATAAGGAAGGCTCAGTCGGTGGCCTCGGCTG
CGCAGGCGCAACTGGAGGAGTCGGCCAACCATGTGCGCAGCATCACCGCC
TCCTTGCACACTGCACAGCAGGAAGTGGCTGCCTCGGCGATTCGGGCTCA
GATCGCCCAGCTTCAGCTGGCGGCCCATGATCAGCTGCTGTTCGCCGCTC
GCCAGGATGTGGACGCGCTGTCCTCGCAAATGGTGGGTCTCCAGGCGGCG
GAGGGCATTGTCCAGCCGAAACTCACAGTGGATCTCCATGCTCTTTTGGA
CAAGCTGAAGCAGCCACTCCAGAATTATGATCGCCCCACGGCCGTTCCCC
TTATTGCACCCAGTCTGCCGGGAACATTAAGCCATCAGCAACAGATGCTC
TTGCAGCAGCAACAGATGGGGCAGGTTCAGGTCAAGGGCCGATCCAAGGA
CAGGGCCAAAACCAGGATCAGGACAGGGACCTGCGAATCCCTCAAATGGA
CCTACCCCAACGATTTCATTAGCTTGCTAGGGCTCATCACTATGCACATG
GATTACCACTGCAAGCTTTCTAGACATCG
FMO05091.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:12:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32846-RB | 1327 | CG32846-RB | 177..1160 | 29..1006 | 4780 | 99.4 | Plus |
| CG32846-RA | 1382 | CG32846-RA | 232..1215 | 29..1006 | 4780 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:12:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2950354..2951195 | 995..158 | 4010 | 99.5 | Minus |
| 3L | 28110227 | 3L | 2951258..2951387 | 158..29 | 650 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:12:28 has no hits.
FMO05091.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:11 Download gff for
FMO05091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32846-RA | 226..1218 | 22..1010 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:59 Download gff for
FMO05091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32846-RA | 226..1218 | 22..1010 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:55 Download gff for
FMO05091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32846-RA | 226..1218 | 22..1010 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:55 Download gff for
FMO05091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2950338..2951194 | 159..1010 | 99 | <- | Minus |
| 3L | 2951258..2951393 | 22..158 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:11 Download gff for
FMO05091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2950338..2951194 | 159..1010 | 99 | <- | Minus |
| arm_3L | 2951258..2951393 | 22..158 | 97 | | Minus |
