FMO05092.5prime Sequence
1212 bp (1031 high quality bases) assembled on 2008-08-11
> FMO05092.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGATAATGGG
GAGGAGACCATGTTGCATCTGCCCAGCTATGCTGATCGCTATACGGACAT
TCCCCGGCTTATCCGATTGAAGTTCATTGCCCAGGTCTGTCCGGAGCTAA
GTGTTCTTGCCCTCGAGTTGGCCCTCAATCATGTGAAGACCACCTACAAT
GTCAAGTTGTACGACGAACTCTACAAAACACTGTGCGTTGAGGTGGACAG
GAAGTACCCCAACCAGTCCAAGGGGAACGAAGAACTTCATACCACTGGTG
GAAGCGAGCCAAGTACGTCGAGTGGCAGGGGGAGAGTTGTGGTTCCCTAT
GATTCCTACTGGGTGGAGGACAACATTATGGAGGCCACTCTGATGCTTCA
GGAACTAGACGCCGAACTGAACTTCAAGAAATCGAATTCGGGCAGCTCCT
ATGTGCGACGCATTCTAGAGGAGATCGGGGATCACCACGAGAAGAGTGGA
AACTTGCAGATGGCGGTCAAGTTTTATGCTCGAGCCAGGCCCTACTGTAC
CAGCAGCGAGAATGTCATCAATATGTTCCGGAATCTGATTAGGGTATCAA
TTTATATGGAAAATTGGTGGCATGTCCTCACCTACATTGACGAGGCCAAG
CAGTATGCCTATGGCTTTGAAAATCTGGCCCAGGAGGTTCCAGCACGTCT
AAGCTGCGTCGCCGGTTTGGCTCATTTGGGCCTAAAGATATACAAGTCTG
CTGCCCAATATTTCCTGAGTACTCCGTATGGGCGTTACGACTACGATAAA
ATCGTGGCACCCGAAGATGTTACTTTATATGCTGGCCTTTGCGCTCTAGC
CACTTTCGATCGGGAAACCTTACAGCTGAACGCTATCAACTCGGAAGCAT
TTAAGGCATTCTTTCAGCTTTCGCAAAAATGTGGACCATATTGGCCAAAT
TCTACGCGGGGGAATTCGATGCCTGTTATGACCCTGTTGCGCGAAATCGA
AATCATGTAGGCTGATGTTTATTTGTCCTCCCATTGTTAGTGCGCTTACG
ATTGATATGGCCGAATGCTGAAGAAAGACAGGGAGTTATGACGATCTGTG
AAACCGGAATTCAGACAGCCTTTTCTAAACTCGTTGCGCGCGGCCAGATA
TGGCTACTTATCAATCTAATCCATTGCGACTGAGCCTAGAGAATTCGTCC
TGACATTGGCTT
FMO05092.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:12:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CSN1a-RA | 1301 | CG4697-RA | 96..1173 | 38..1103 | 4975 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:12:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14762860..14763871 | 38..1047 | 4725 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:12:33 has no hits.
FMO05092.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:13 Download gff for
FMO05092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CSN1a-RA | 90..1173 | 31..1103 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:59 Download gff for
FMO05092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CSN1a-RA | 1..1077 | 39..1103 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:56 Download gff for
FMO05092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CSN1a-RA | 90..1173 | 31..1103 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:56 Download gff for
FMO05092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14762854..14763942 | 31..1107 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:13 Download gff for
FMO05092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14762854..14763942 | 31..1107 | 97 | -> | Plus |
