Clone FMO05093 Report

Search the DGRC for FMO05093

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:50
Well:93
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG9308-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO05093.5prime Sequence

652 bp (652 high quality bases) assembled on 2008-08-11

> FMO05093.5prime
ACTTTATACGAAGTTATCAGTCGACATGCTGTCAGCTTTTGTCTTAGTGT
TAGTGCTTTTTCAAGCGGCTTGTGGCTTCATCGTTACCCTGGATGCCCAC
GAGACGATGTGCTTCTACGATCATGCCAATGTCAGCGACAAGGTGACCGT
GTCCTTCGAGGTAATGGAAGGTGGCTTCAAGGATGTGGGCGTGGAGATTG
CTGGACCAGACGACGATCGCCTGCACCACTCCAAGCAGGACACCATGGGC
AGCTTCACCTTTACGGCCATGAAAGAGGGACGGTACCAATTGTGCTTCGA
CAATAAGATGTCCACGATGACGCCCAAGATCCTAATGTTCCAATTTCACG
TTGCCAGGGCCATTGAGTTCTACATGGACTCCTCGAAGCGAGTTGACGAC
GTCATCGAGCAGGCGACGGTCCAATCGATGATCAACCAACTCTCCGCCAA
ACTGGGAGCCGTGAAAATGGAGCAGGAGTACATGCACTTTCGCTATCGCG
GTCACTTGGAGGTCAGCGATATGGTGGAACTGCGAGTCCTGGCGTGGTCT
ATATTTGGACCAATGATGCTGATCATTACGGCCGTTCTGGAGGTATACTA
CCTCAAGCATTTCTTCGAAGTCAAGCGCGTGGTTGCAAGCTTTCTAGACC
AT

FMO05093.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG9308-RA 823 CG9308-RA 78..686 26..634 3030 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22034921..22035529 26..634 3030 99.8 Plus
Blast to na_te.dros performed on 2014-11-28 22:41:51 has no hits.

FMO05093.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:38 Download gff for FMO05093.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9308-RA 78..692 26..641 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:18:32 Download gff for FMO05093.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9308-RA 78..692 26..641 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:48 Download gff for FMO05093.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9308-RA 78..692 26..641 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:48 Download gff for FMO05093.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 22034921..22035535 26..641 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:38 Download gff for FMO05093.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17922426..17923040 26..641 99   Plus