FMO05110.5prime Sequence
1233 bp (1022 high quality bases) assembled on 2008-08-22
> FMO05110.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCACTTTCCGCA
ACGAAGGACACTAGTCCATGGACCAACATGGTGAAGAGGGTAACAGCGAG
CAAATACGATGTAGTCTCGGTCAAGACGCTGCTGATGTTTATCAACAGCA
AACTGGATTGCGAATTGCGAGGCTTTGAGGATCTGAAAACAGGAGCAGTA
TATTGCCAACTGATGCACAGACTCTTTCCCAATTCGATACAAATTCATAA
GGTCAAGTTTTATACGAACGACATCAGCGACTTTCAGTTAAATTTCCGGT
TACTAAACAATTGCTTTCAAAAACTAAGAGTAACCGTTTATATGCCAGTG
CATGAGTTAACTCTGGGACACAATCAAGTGGTCTTCTGCAATTGGATATA
CAAGTTCTATGAAGCAAACGACAAGGGGAACGAATACGATGCCAGAAAGG
TGAGAAAAGGCTCGCCAATCGGTTTAGACAATAGTTATAAGGTAGCCTCC
ATCTCAACTGGCAGCACCTGTTCAGTGCATAAATGCCAGTCGATGGTCTT
TAATTATGCAAAAAAGCCCGTCCGATTCGAGAGGCAAAACAGCCTCGATG
CTCTATCATTCAGACCGGGCATCTTTAAGAGTATTCGTAGGGAGAAGCCA
ACCGAACAGGCGAATCCAGAACCACAGCAGACAAAGAATATCAAAAAGTC
CTCACAATTCCTTGCCGAGAGCAAGCACGTTTCTCTGCCATCGGATAGCG
AAGATGAGTTGGAACTTAAAGCCCAAAAACGTTATTTGCAAGATCAGTTT
GTGAAAAAGCTCAATAGCAGTAGAATGATGAGAAGACTGGCACAGACGCA
ACGTCAAAAATCTCGGAAATTCCAGGACCAAATCCAGAAAACGAGCACTA
AACACTGTATGCGAAAAGTATGAGCAGGAAACGAGTGATCTGCGATCCAT
CTTAATTTGATCGACAACTAGATTACAGCTACAAAACTTACAGATTGATA
AGAAAGCTGACTACAGTTGTCACGGCGGGGAGTCATATTAAACAACACGA
TTTAATCCAGAAAAGCTGTTCTAAATTAGAAATTGCTATTGAACCCAGGC
ACAGCGCAAGATGCATCCTGTTAGCGTATACCCTTATGATGGAAATGAAT
TACCGAAGAGAATTCAGCTGACGACTTCCGTCAGGGAAGTTACGTGACCC
CTCTAGTAAAATCCAATCCACATAAGTGGTGTC
FMO05110.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31907-RB | 1574 | CG31907-RB | 78..1222 | 35..1159 | 4950 | 96.8 | Plus |
| CG31907-RA | 1470 | CG31907-RA | 78..1222 | 35..1159 | 4950 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7059738..7060710 | 1002..35 | 4600 | 99.4 | Minus |
Blast to na_te.dros performed 2014-11-28 20:14:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| diver2 | 4917 | diver2 DIVER2 4917bp | 346..392 | 782..831 | 117 | 74 | Plus |
FMO05110.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:07:58 Download gff for
FMO05110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31907-RA | 73..1170 | 29..1111 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:11:57 Download gff for
FMO05110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31907-RA | 56..1153 | 29..1111 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:28 Download gff for
FMO05110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31907-RA | 73..1170 | 29..1111 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:28 Download gff for
FMO05110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7059635..7060713 | 30..1095 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:07:58 Download gff for
FMO05110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7059635..7060713 | 30..1095 | 97 | <- | Minus |
