FMO05114.5prime Sequence
956 bp (956 high quality bases) assembled on 2008-08-22
> FMO05114.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGTACGAACTGAAG
ACTCTGCTGCCGCAATTCGACATAAAGCTGCCCACCTGCATGTATCCTCT
CAAGAACGTTAGCCTGGCGGCGGATTCCTTGGCCAGCGGCTCCTCCACAT
CCGCATCCACATCCGCGTCCACATCATCATGCGACGATACGGCATCAGTG
GCCGCCCGACAGGAGAAGGTTCTCAAGCAGCTGGAGGAGCTGAAGGCGCA
GCTGGGACAAATCCGGGCGGGACTTGGTGTTTGTGGCAAGACTTTCCAGC
ACACGACTGCTTTCCAGAATGGTGGATTAAAGGAGGTGCCACTGCAGGAT
GTCGTCATCAATGGACATCCCAACTTCATACCCTATGCCTTGTTGGCCCT
GAAAAATGCCTGGCGCAATCTGTACACTATTGATGTCAAGACCTTTACGC
ACTCTACGATGGCCGACATTGGACCAGCAGCACGGGAATTCGAGGCCAAC
TTGGCGAAGGTTCCAGTAAACCCTGCTTTGCCCAAGATTAGTGTGACGCT
CATCTGGAAGAACTGCGAACACACCGAGATGATCAGCTCGCCCACCATGT
ACGTGCCCATCTACGGAGAGGTGAACATCATTCGCTATCTGGGCCGTGTG
GGTCCAGCCGAGTATCGTTATGAGGGCTCTCCGCTCTGCAATGAGATCGA
CCTTGTCCTGACATTTGCTACCAACTGCTGCGCTGCAACACGCACAAAAC
GCAGGTGGCCATGGTGCGCCTGCTGGACAAGCGACTGCAGAAGCAGCAGT
ATTTCGGTGGATCCCAGATGTCGGTGGGCGGATGTCGGTGTCTACAGCTC
ACTGATACGCATGCCAGCTGTTACCGAGAGGATCTGACGCCTGCGCTAGT
GGCTTGGAGAAAAAGGGCCAAGCTCGTGGTTCAAATTGCAAGCTTTTCTA
GACCAT
FMO05114.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12304-RB | 1051 | CG12304-RB | 98..1000 | 36..937 | 4445 | 99.7 | Plus |
CG12304-RA | 1150 | CG12304-RA | 344..1099 | 183..937 | 3710 | 99.6 | Plus |
CG12304-RA | 1150 | CG12304-RA | 98..244 | 36..182 | 735 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15584923..15585296 | 565..937 | 1725 | 99.2 | Plus |
3L | 28110227 | 3L | 15584638..15584869 | 334..565 | 1160 | 100 | Plus |
3L | 28110227 | 3L | 15584287..15584441 | 183..337 | 775 | 100 | Plus |
3L | 28110227 | 3L | 15583735..15583882 | 36..183 | 740 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:42:47 has no hits.
FMO05114.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:43 Download gff for
FMO05114.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12304-RB | 98..1003 | 36..941 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:12:11 Download gff for
FMO05114.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12304-RB | 93..998 | 36..941 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:11 Download gff for
FMO05114.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12304-RB | 98..1003 | 36..941 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:11 Download gff for
FMO05114.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15583714..15583881 | 19..182 | 94 | -> | Plus |
3L | 15584287..15584439 | 183..335 | 100 | -> | Plus |
3L | 15584640..15584868 | 336..564 | 100 | -> | Plus |
3L | 15584923..15585299 | 565..941 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:43 Download gff for
FMO05114.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15576814..15576981 | 19..182 | 94 | -> | Plus |
arm_3L | 15577387..15577539 | 183..335 | 100 | -> | Plus |
arm_3L | 15577740..15577968 | 336..564 | 100 | -> | Plus |
arm_3L | 15578023..15578399 | 565..941 | 98 | | Plus |