FMO05128.5prime Sequence
454 bp (454 high quality bases) assembled on 2008-08-22
> FMO05128.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGTTCCGCTACATGC
TCGTCGCCTCCGCCGTCCTGGCCTGCGCCTACGGTGCCGCCACCTACAAC
CAGGAAGCTGGTGCCTACATCACCAAGATCGGCTCCGACATCCAGCCCGA
GGGCAACTACAACTACCAGTACGAGACCAGCAACGGCATCGCCGCCCAGG
AGTCCGGAATTGGTGGAAACCACGCCAACGGAGGCTTCTCGTGGTACTCG
CCAGAGGGTGAGCTCGTCCAGATCTCGTACGTGGCCGACGAGAACGGCTA
CCAGCCACAGGGAGCTCTCCTGCCCACTCCTCCCCCAATCCCAGCTGCCA
TCCTTAGGAGCTTGGAGTACATCCGTACCCATCCCCAGTATGTCGAGCAG
GAGTACCGCAGGCCCGCCCTCAAGAAGGTCTTTGGTGCAAGCTTTCTAGA
CCAT
FMO05128.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr67Fa2-RA | 565 | CG18349-RA | 45..456 | 25..436 | 2015 | 99.3 | Plus |
| Cpr67Fa1-RA | 554 | CG7941-RA | 60..461 | 35..436 | 1800 | 96.5 | Plus |
| Lcp4-RB | 527 | CG2044-RB | 274..345 | 283..354 | 225 | 87.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10892014..10892407 | 43..436 | 1955 | 99.7 | Plus |
| 3L | 28110227 | 3L | 10890219..10890607 | 48..436 | 1750 | 96.7 | Plus |
| 2R | 25286936 | 2R | 8437977..8438048 | 283..354 | 225 | 87.5 | Plus |
| 2R | 25286936 | 2R | 8435769..8435840 | 283..354 | 210 | 86.1 | Plus |
| 3L | 28110227 | 3L | 7093638..7093706 | 320..388 | 180 | 84.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:23:33 has no hits.
FMO05128.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:27 Download gff for
FMO05128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fa2-RA | 45..459 | 25..440 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:12:30 Download gff for
FMO05128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fa2-RA | 16..430 | 25..440 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:35 Download gff for
FMO05128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fa2-RA | 45..459 | 25..440 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:35 Download gff for
FMO05128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10892018..10892410 | 47..440 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:27 Download gff for
FMO05128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10885118..10885510 | 47..440 | 99 | | Plus |
