FMO05132.5prime Sequence
325 bp (325 high quality bases) assembled on 2008-08-22
> FMO05132.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGCGCAATTATCTCT
GGTTAGCAGTGCTCCTGGTGGTGGCCACCACCTGCATCAAGGCCAAGCCG
CTGGTCTCCTTCGGTGTCAGCTACCAGCAGCCTTACCTGGGCCCCCAGCC
AGAATCCTACTACTACGGAGGACGGTACCCGGCTGGTGGCTACTACAACA
ACTACCACAACAGCCCGGGTCCGTACGGCTACCCCTATCCGTATGCCAAT
CGCTATGGTGCCCTCGATCTCGGAATCGGCGCCCTGTCGCTATCGTCGTT
CCTGCTCGCAAGCTTTCTAGACCAT
FMO05132.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13053-RB | 620 | CG13053-RB | 297..569 | 35..307 | 1365 | 100 | Plus |
| CG13053-RA | 358 | CG13053-RA | 35..307 | 35..307 | 1365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16259088..16259343 | 307..52 | 1280 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:42:56 has no hits.
FMO05132.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:50 Download gff for
FMO05132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13053-RA | 29..307 | 27..307 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:12:36 Download gff for
FMO05132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13053-RA | 29..307 | 27..307 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:17 Download gff for
FMO05132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13053-RA | 29..307 | 27..307 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:17 Download gff for
FMO05132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16259088..16259342 | 53..307 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:50 Download gff for
FMO05132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16252188..16252442 | 53..307 | 100 | <- | Minus |
