FMO05138.5prime Sequence
642 bp (642 high quality bases) assembled on 2008-08-22
> FMO05138.5prime
CATTATACGAAGTTATCAGTCGACATGCACAGCCAACAACTGACTTTGAT
TTTCGGCATGACCCTCCTGTGGTCAATGGCCAGCGGCACCACCCAACCGC
CGAGCCGACGTCCGCCGGTTACCACCGCCCGCACCACGCCCCGCAATTGC
CCGCTCTTCCCGCAGGTCTGCTCCCAGACAAGTCCCAGAGTTTGCGGACG
AACTGCGCGTGGCGAGTGCCAACGTTTCGAGAACATCTGCCACCTGATGC
TGGCCAATGTGCTACGGCAGCCGGAGGGCGTGCGGCACACCCGCGACATC
GATTGCCGCAACGTGAGGGGAACGGGTGCCGCCAATCGGCGACCCTGCTA
TAATCCCTGCCCCGCACGTCCCGTCGTCTGCAAGAGATCACCGCCCAGCC
AGCAAATCTGCGTGCGTAGCAGGGACAACCGGCAGTGCAAGGTGTTGGCC
AATAGTTGCCAGCTGCGCAACCAGAATTGCCACAGTCAGCCCAGGAACAA
CTGGCTGCGCACCGACAGGCGGCGTTGTGGACAGCTGCAGCTGGGCGATA
AGCCGCAGAATTGCATCCGGGTGCCAGTGCGGCCCAAACCCACACGTGCG
CAGCACCACTCGACGCAGCACTACGCAAGCTTTCTAGACCAT
FMO05138.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32762-RB | 854 | CG32762-RB | 67..666 | 25..624 | 2985 | 99.8 | Plus |
| CG32762-RA | 822 | CG32762-RA | 35..634 | 25..624 | 2985 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5500618..5501062 | 499..55 | 2225 | 100 | Minus |
| X | 23542271 | X | 5500396..5500520 | 624..500 | 610 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:35:36 has no hits.
FMO05138.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:27 Download gff for
FMO05138.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32762-RA | 14..628 | 15..630 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:12:41 Download gff for
FMO05138.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32762-RA | 14..628 | 15..630 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:22:22 Download gff for
FMO05138.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32762-RA | 25..639 | 15..630 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:22:22 Download gff for
FMO05138.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5500391..5500520 | 500..630 | 96 | <- | Minus |
| X | 5500618..5501061 | 56..499 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:27 Download gff for
FMO05138.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5394424..5394553 | 500..630 | 96 | <- | Minus |
| arm_X | 5394651..5395094 | 56..499 | 100 | <- | Minus |
