FMO05139.5prime Sequence
294 bp (294 high quality bases) assembled on 2008-08-22
> FMO05139.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCCTCCTCCACC
ACCGCACCACCACCACAACCCGCCGCCTCATGGGCCACCGCCCCACGGAC
CACCGCACCATGGACCTCCGCACCATGAACCACAGCCCCCGTTCCACACG
CCAGTGCATCCGATTTACCACGAACCTCCTCACGGAAACAGCTCCGGCTA
CAATCCTCCGCCGCCGCATGGTCCGTATCCATATGGTCCAGGATACGTGG
CCCCAGGACCTCCAATGCATCCGCGAGCAAGCTTTCTAGACCAT
FMO05139.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5011-RB | 550 | CG5011-RB | 190..429 | 37..276 | 1200 | 100 | Plus |
| CG5011-RA | 443 | CG5011-RA | 83..322 | 37..276 | 1200 | 100 | Plus |
| CG43349-RB | 459 | CG43349-RB | 141..193 | 73..125 | 190 | 90.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1200860..1201099 | 37..276 | 1200 | 100 | Plus |
| 2L | 23513712 | 2L | 1200345..1200397 | 73..125 | 190 | 90.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:43:06 has no hits.
FMO05139.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:56 Download gff for
FMO05139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5011-RA | 76..326 | 30..281 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:12:42 Download gff for
FMO05139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5011-RA | 617..867 | 30..281 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:22 Download gff for
FMO05139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5011-RA | 76..326 | 30..281 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:22 Download gff for
FMO05139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1200860..1201103 | 37..281 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:56 Download gff for
FMO05139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1200860..1201103 | 37..281 | 99 | | Plus |
