FMO05140.5prime Sequence
829 bp (829 high quality bases) assembled on 2008-08-22
> FMO05140.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGGATGCGAG
GAGAACCACTTCCGGGTTTGGCCAATATCGAGAGGCATCGCTCCACCGAA
GCTGTGCCCCAAGGTCGTGTGATCGGTGGCACCACCGCCGCCGAGGGCAA
CTGGCCCTGGATAGCAAGTATCCAAAATGCATACTCGTATCACTTGTGCG
GAGCCATCATACTCGACGAAACTTGGGTGCTCACAGCGGCCAGTTGCGTG
GCGGGATTGAGGCCATTAAATCTGCTGGTTGTGACTGGAACTGTGGACTG
GTGGGATCTGTATGCTCCGTACTACACTGTGAGCCAGATCCATGTGCACT
GCAACTTCGACAAGCCGCTGTATCACAATGACATAGCCCTGCTGCAGTTG
TCGTCCAAAATCGAGTTCAACGATGTGACAAAGAATATAACCTTGGCGGA
TATCGATGAATTGGAAGAGGGGGATAAGTTGACCTTTGCCGGTTGGGGCA
GCTCCGAGGCCATGGGCACCTATGGTCGCTATCTGCAGGAGGCATCCGGC
ACATATCTGCCGGTGGACGCATGCCGGGAGAAGTTGCAGAACCAAGATGA
TGTGGACCTGGGTCATGTGTGTGTCCAAATGGACGCGGGCCAGGGCGCCT
GCCATGGCGACACTGGCGGACCGCTTATCGATGAGCAGCAGCGCTTGGTA
GGCATCGGTAATTGGGGTGTGCCATGCGGACGTGGCTATCCGGATGTGTA
TGCGCGTACTGCCTTCTACCACGATTGGATCCGCACCACCATGAATGGAT
GTACGATCGCCGCAAGCTTTCTAGACCAT
FMO05140.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31266-RB | 993 | CG31266-RB | 95..869 | 37..811 | 3875 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17132756..17133462 | 37..743 | 3535 | 100 | Plus |
| 3R | 32079331 | 3R | 17133526..17133595 | 742..811 | 350 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:28:25 has no hits.
FMO05140.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:57 Download gff for
FMO05140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31266-RB | 92..869 | 31..811 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:12:44 Download gff for
FMO05140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31266-RA | 60..837 | 31..811 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:34 Download gff for
FMO05140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31266-RB | 92..869 | 31..811 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:34 Download gff for
FMO05140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17132742..17133461 | 30..742 | 98 | -> | Plus |
| 3R | 17133527..17133595 | 743..811 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:57 Download gff for
FMO05140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12959249..12959317 | 743..811 | 100 | | Plus |
| arm_3R | 12958464..12959183 | 30..742 | 98 | -> | Plus |
