FMO05145.5prime Sequence
1227 bp (1058 high quality bases) assembled on 2008-08-22
> FMO05145.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCCGGAGGCGC
TACACTTTACATCGATCTTTGATCTCATCATCAAGAGCGCGATGCCATGG
TTTGGCATGGACATCGGCGGAACCCTCACCAAGCTGGTCTACTTCGAGCC
CAAGGACATAACGCCGGATGAGCAGGATCGCGAGGCTGGCATTTTGCGGA
ATATCCGACGCTACTTGACCAAAAACTCGGCGTACGGCAAAACCGGACAT
CGTGATACGCACCTACAGATGGACAATGTCGAGATACGCAAAAGACGCGG
CTCCTTGCATTTCATTCGCTTCCAGACCACGGACATGGGCAACTTCCTAT
CGCTTGCCAAGCAGAAGGGCATGGCCGAGCTGGTGACCACGGTTTGTGCC
ACCGGCGGTGGCGCATTCAAGTTCGAGCAGGATTTCCGCGACCAAGTCAA
CATGAAGCTGGCTAAATTCGACGAGCTGGACACGCTCATCAAAGGCATTC
TCTTCGCCGATCTGCATAATCGCACGGAGTGCTACTACTACGAAAACGCA
CGTGACATTCTAAAAAGCGAAAAGCAGCAGTTCAATTTCTCTCAACCGTT
TCCGTTTATTCTGGTGAACGTCGGATCCGGAGTCTCCATCCTGGCGGTCT
ACGGTCCCGACAACTACAAGCGGATTTCGGGCACGAGCTTGGGCGGCGGT
ACATTCCTCGGCCTGTGTTGTCTACTCACCGGCTGCACATCCTTCGAAGA
GGCCATCCAACTGGCCACCAAGGGTGACAATAGGAAGGTGGACAAGTTAG
TTAAGGACATTTATGGTGGCGATTACAACCGCTTTGGTCTCCCCGGCGAT
TTGGTGGCGTCAAGCTTTGGCCAGATGCATCTCAACGACAAACGGGTTTC
CGTATCACGCGAAGATCTGGCCAACGCCACTCTGGTCACCATAACGAATA
ATATCGGCTCCATAGCAGGATGTGCGCGCTGAATGAGAAGATCGATAGGG
TCGTCTTTGTGGCACTTTCTGCGAGTTACCCCATTTCATGAGCTGCTGCG
TACGCATTGAGTCTGGTCATGCACATGAGGTCTTTCTGAGCCGAGGGAAA
CTTGGGGCCTCTGGTGCTGCTGCGATCACGGCGACTGCACGCCCTTTACC
GACGGATGAACCTATCACTGATCGATCAGAAGCGGAGCGAACGTAGCCTT
CTCAGCGGGGAGTGATCCTAGAAGAGG
FMO05145.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:53:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fbl-RA | 1866 | CG5725-RA | 335..1430 | 38..1114 | 4975 | 97.9 | Plus |
| fbl-RG | 2352 | CG5725-RG | 412..1457 | 88..1114 | 4725 | 97.8 | Plus |
| fbl-RB | 1910 | CG5725-RB | 426..1474 | 85..1114 | 4725 | 97.7 | Plus |
| fbl-RG | 2352 | CG5725-RG | 335..386 | 38..89 | 260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:53:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20389913..20390208 | 266..561 | 1480 | 100 | Plus |
| 3L | 28110227 | 3L | 20388668..20388847 | 89..268 | 900 | 100 | Plus |
| 3L | 28110227 | 3L | 20390456..20390634 | 686..864 | 895 | 100 | Plus |
| 3L | 28110227 | 3L | 20390688..20390827 | 863..1001 | 650 | 99.3 | Plus |
| 3L | 28110227 | 3L | 20390268..20390393 | 562..687 | 630 | 100 | Plus |
| 3L | 28110227 | 3L | 20387950..20388001 | 38..89 | 260 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 18:53:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 3555..3616 | 1018..957 | 121 | 66.1 | Minus |
FMO05145.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:18 Download gff for
FMO05145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RA | 331..1374 | 30..1068 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:12:52 Download gff for
FMO05145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RA | 331..1374 | 30..1068 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:31 Download gff for
FMO05145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl-RA | 331..1374 | 30..1068 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:31 Download gff for
FMO05145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20387946..20388001 | 30..89 | 93 | -> | Plus |
| 3L | 20388669..20388847 | 90..268 | 100 | -> | Plus |
| 3L | 20389916..20390208 | 269..561 | 100 | -> | Plus |
| 3L | 20390268..20390393 | 562..687 | 100 | -> | Plus |
| 3L | 20390458..20390634 | 688..864 | 100 | -> | Plus |
| 3L | 20390690..20390825 | 865..999 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:18 Download gff for
FMO05145.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20381769..20381947 | 90..268 | 100 | -> | Plus |
| arm_3L | 20383558..20383734 | 688..864 | 100 | -> | Plus |
| arm_3L | 20383790..20383925 | 865..999 | 99 | -> | Plus |
| arm_3L | 20383016..20383308 | 269..561 | 100 | -> | Plus |
| arm_3L | 20383368..20383493 | 562..687 | 100 | -> | Plus |
| arm_3L | 20381046..20381101 | 30..89 | 93 | -> | Plus |
