FMO05149.5prime Sequence
1202 bp (745 high quality bases) assembled on 2008-08-22
> FMO05149.5prime
ATTATACGAAGTTATCAGTCGACATGGATTCAATGTACGGAATTATTGCA
ATAGTGTCGCTCATCCTGGTCGCTGGTCAAGTCCAGGCACAGGGCCAGAA
CGCGGAACTTAATCAAAGTTGCGGTGCATCAAATGAGCACCAATGCGTCC
CGCGTCATATGTGCAAGGTCAAAATTGAGTTTCGAATGGCAATGACATAC
CGCAACCTAGGATGTGTTTCAACTGCGATTTGCTGCCCCAAGAACCTAAT
AATCAAGGAGCCTAGACTTATCATTAATGAACCGATAACTGATCCCCAGT
GCGGATTTGTCAACTCGAAAGGTGTGACCTTCTCATTTAGAGAGGAGGAT
ACGGGCTTGGCCCAGGAGGCGGAGGTACCATGGATGGTGGCCTTGCTGGA
TGCCAGAACCAGCAGCTATGTGGCCGGTGGCGCCCTCATCGCTCCACATG
TAGTGATCACGGCCAGGCAAAGAACCGAAAACATGACCGCAAGCCAGCTT
GTTGTGCGAGCTGACGAAAGGGACTTCAGCACCAAAACCGAGCAGCTTCC
TTCTGTGGACGTTCCTATTCGGTCAATTGTCCGTCATCCTGGCTTCAATT
TAGAGAATGGGGCCAATAATGTGGCCCTTGTGTTTTCTTCGCAGATCGCT
CACCAGCTCTGCGCCACATAAAATCCAATATGTATGCCGATCGGCTCCAA
AGAATTTTGACTTTAAGCCGGTGCATATTTACGGGCTGGGGAAAGATTTC
CTTTGACGATCCCTCCTATATGAATGTCCCTGAAAAAAATATCATTGCCG
GCGGTCCAAAAGGCGTACCTGGTGAGCGGCACTTCCCCTCTATTACGGAA
ACGATTTTGAACTGGATCACAGCTAATTGTGCGCAGCGGTGAGCCTGAAA
AAGATTCCGTGCAAGGTGACGTTGAATCCCGCTAGCCTGGAGCGATAAAA
AACAATCCCAACGCTACGAACTGGCTGCATTGGGACTTCTGGGTTGACTG
GCGGTTGCCTGGCGTTCCGGCTGTTTAAACAATTAGCTAACTATTGAATG
ATTACCTTTGAACACTGTCACTGCCCTGCTGAAAGCGCAGGAGTTCTTAC
AGTCAACGTTCTGCAGCCGGTTCTAACGGACACGAACTTGAAGCTCCAAG
GTTCAAGTTATCTCTCGCATCCGGACCAAGATCTGGCCAAAATCAGGACG
CG
FMO05149.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18477-RA | 1483 | CG18477-RA | 6..1053 | 24..1070 | 4330 | 95.4 | Plus |
| CG31780-RB | 1483 | CG31780-RB | 6..1053 | 24..1070 | 4330 | 95.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15661504..15662281 | 252..1032 | 2765 | 94.5 | Plus |
| 2L | 23513712 | 2L | 15696501..15697278 | 252..1032 | 2765 | 94.5 | Plus |
| 2L | 23513712 | 2L | 15661046..15661273 | 24..251 | 1140 | 100 | Plus |
| 2L | 23513712 | 2L | 15696043..15696270 | 24..251 | 1140 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:43:19 has no hits.
FMO05149.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:03 Download gff for
FMO05149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31780-RB | 1..1022 | 20..1041 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:12:57 Download gff for
FMO05149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31780-RB | 1..1017 | 24..1041 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:23:43 Download gff for
FMO05149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31780-RB | 1..1022 | 20..1041 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:23:43 Download gff for
FMO05149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15661037..15661273 | 13..251 | 97 | -> | Plus |
| 2L | 15661504..15662292 | 252..1041 | 94 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:03 Download gff for
FMO05149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15661037..15661273 | 13..251 | 97 | -> | Plus |
| arm_2L | 15661504..15662292 | 252..1041 | 94 | == | Plus |
