FMO05153.5prime Sequence
519 bp (499 high quality bases) assembled on 2008-08-22
> FMO05153.5prime
TCGTATAGCATACATTATACGAAGTTATCAATCCACATGTTCAAATTGTT
CGTTCTCGCTGCTCTTTTGGCCGTGGCCGCCGCCAAGCCCGGTCACCTGG
CTGCTGCTCCTCTGGTCTACAGCGCTCCCGCCACCACCACCGTCGTCCAG
GAGCCCGTTCTGGCCAAAGTGGGTGCTGTTGTGAAGAGCGTGCCCACCGC
CGTGTCCCACCAGAGCCTGACCCAGGTGCACAGCACCCCCGTGGTGGAGG
ATGTGGTGGCTCCCGTGGTCAAGACCACCGCTGTCCACTCCGCTCCCGTG
TTGGCCGCCGCACCCATTGTGAAGACTTTGGCTCCCGTCGCCTACTCTGC
TCCTCTGGCCTACTCCGCCCCGGTGGCCTACTCCTCGTATGCCGCTCCTC
TGACCTATTCCGCACCGGTGGCCTAATCGGCTCCCCTCTCCTACACCGCC
CCAACTCCCCTGCTGCACCACGCCCCTCTGACCTACGCCGCTGGCTCCTG
GGCAAGCTTTCTAGACCAT
FMO05153.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13044-RA | 624 | CG13044-RA | 66..530 | 37..501 | 2280 | 99.4 | Plus |
CG13043-RA | 646 | CG13043-RA | 185..327 | 139..278 | 290 | 81.1 | Plus |
CG13063-RA | 544 | CG13063-RA | 46..292 | 35..278 | 240 | 73.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16302584..16303037 | 501..48 | 2225 | 99.3 | Minus |
3L | 28110227 | 3L | 16305544..16305686 | 278..139 | 245 | 79.7 | Minus |
3L | 28110227 | 3L | 16306779..16306906 | 107..234 | 205 | 77.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:27:48 has no hits.
FMO05153.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:24:39 Download gff for
FMO05153.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13044-RA | 66..533 | 37..505 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:13:02 Download gff for
FMO05153.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13044-RA | 48..515 | 37..505 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:12:55 Download gff for
FMO05153.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13044-RA | 66..533 | 37..505 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:12:55 Download gff for
FMO05153.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16302581..16303036 | 49..505 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:24:39 Download gff for
FMO05153.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16295681..16296136 | 49..505 | 98 | <- | Minus |