FMO05155.5prime Sequence
601 bp (601 high quality bases) assembled on 2008-08-22
> FMO05155.5prime
GTATAGCATACATTATACGAAGTTATCAATCGACATGCGTGCCTACATTG
CAATTACCCTGCTGGCCCTGGTGGCAGTTGTCGTGGCCCAAGGGGGAGGC
GGAAGACGTGGTGGACGCGGTGGCGGCGGAGGCGGTGGCCGAAGTCTTGG
AGGATTCGGAGGACGTGGAGGCGGTGGCTTCGGCGGTCGCGGTGGTCCTG
GTGGTACTGGTGGCCCCGGTGGCTTCGGCGGACCTGGTCGCTTTGGAGGG
CCTGGAGGACTTGGCGGTGGTGGAGGATTCGGAGGTCCCGGCCGCTTTGG
CGGTCCCGGAAGCTTCAATGGTGGATTCGGCGGTCCTGGCGGTTGGGGCC
CACGTCCACGTCCTCGTCGCCCAAGACCTTGGTGGACGACAACGGAGAGT
TCCTTGGCCGACACCAGCAGCACAACTAGCAGCTCCTCCAGCTCCACCGA
CAGCAGCTCCTCTGCCAGCTCCACTGATAGCTCCACCGATAGCTCCACCG
ATAGCTCCACCGATAGCTCTACCGATAGCTCCACCGATAGCTCCACTGAT
AGCAGCTCCACGGAGAGCACTACTGGTTCGGGAGCAAGCTTTCTAGACCA
T
FMO05155.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10918-RA | 643 | CG10918-RA | 14..562 | 35..583 | 2745 | 100 | Plus |
| CG10918-RA | 643 | CG10918-RA | 419..496 | 479..553 | 215 | 85.9 | Plus |
| CG10918-RA | 643 | CG10918-RA | 458..532 | 440..517 | 215 | 85.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21428695..21429243 | 583..35 | 2745 | 100 | Minus |
| X | 23542271 | X | 21428725..21428787 | 529..467 | 255 | 93.7 | Minus |
| X | 23542271 | X | 21428749..21428811 | 553..491 | 255 | 93.7 | Minus |
| X | 23542271 | X | 21428725..21428775 | 517..467 | 210 | 94.1 | Minus |
| X | 23542271 | X | 21428761..21428811 | 553..503 | 210 | 94.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:49:51 has no hits.
FMO05155.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:17 Download gff for
FMO05155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10918-RA | 14..568 | 35..591 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:13:06 Download gff for
FMO05155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10918-RA | 1..552 | 35..584 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:15 Download gff for
FMO05155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10918-RA | 14..568 | 35..591 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:15 Download gff for
FMO05155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21428689..21429256 | 19..591 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:17 Download gff for
FMO05155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21299716..21300283 | 19..591 | 97 | <- | Minus |
