FMO05158.5prime Sequence
937 bp (937 high quality bases) assembled on 2008-08-22
> FMO05158.5prime
ACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAAGATCTT
CTACGGAGCTCTGCTGGTGCTGGGCACAGCAATTATTGCCCAGGCGGCTG
TTGCCCGTTCCAACGACGAGTCCGCCCAGGATACCGCCCAACAGTCCAAG
TACCGCCTGTTCAAGCAGCCAGTGCAGATCGAGGCACGCAGCTTACAGCA
GCTTATGTCCCTGAAGAACCCACCTTGTCCTCCGGCAGCCACCACAACAA
CATCTGTGCCCACCACAACCACAGTGACGACCTCACCCACTGGGCCCACT
ACCACAACTGGAACGTCCACAACAACCACCACACCCACGACAACTTCCAC
AAACCCTACCACCACCGCTCGTCGCTCATTCAACCAGAACAATTTGGTCG
ACGGAAACGAGGACGACGACGATGAGGAGTTTGACCAGGATGTGGAGGAA
GAGAAGTATCTGAAGGACGAGGATGAAGTGCAGGAGGACGACCAAGATGA
TGACGATAACGAGGACGACGGCTTCCAGCTTGTGGCTCCCAAAGCCTCTG
CATCCTCATCCTCTTCTATTCGCCGTCGCAACAGCGCTAGCAGCTCCTAC
GGATCGTCCGGCAACAAGAATCTGTCCAACAGCGAATTGATGCGCGAAAT
CGAACTGCGCCGGCAGAAGGAACTCAACGAGCAGCTGCGCAAGCAGCTTG
CCAGCTCCCGTCGCCGTTCCAACCAGAGCCGCCGTCGTGCCCTAAACAAA
CGCCGTCGTGCCCTTCGCCGCCAGCAGCAGAAGCGCCGCCGCCTGTCCCG
TCGCCAGCAGCAGAAGCGTCGCTCCAGAACCGCCGTCATCGCAACGCCCG
CCGCCGTCAGCGACGCAACAATCGCCTGAGCCGCCTCCGTCAGCGCCGTC
GCGCCAACCGTCGCCGCAACGCAAGCTTTCTAGACAT
FMO05158.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14422-RA | 1048 | CG14422-RA | 91..972 | 40..920 | 4385 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2943672..2944493 | 100..920 | 4060 | 99.9 | Plus |
| X | 23542271 | X | 2943476..2943536 | 40..100 | 305 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:28:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2436..2549 | 236..349 | 111 | 55.3 | Plus |
FMO05158.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:59 Download gff for
FMO05158.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14422-RA | 85..977 | 32..926 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:12:54 Download gff for
FMO05158.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14422-RA | 1..885 | 40..923 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:36 Download gff for
FMO05158.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14422-RA | 85..977 | 32..926 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:36 Download gff for
FMO05158.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2943470..2943536 | 32..100 | 94 | -> | Plus |
| X | 2943673..2944498 | 101..926 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:59 Download gff for
FMO05158.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2837503..2837569 | 32..100 | 94 | -> | Plus |
| arm_X | 2837706..2838531 | 101..926 | 99 | | Plus |
