FMO05173.5prime Sequence
496 bp (496 high quality bases) assembled on 2008-08-22
> FMO05173.5prime
ACATTAAAGGAAGTTATCAGTCGACATGGCTCCAAGAAAGGCTAAAGTTC
AGAAGGAGGAGGTTCAGGTCCAGCTGGGACCCCAAGTTCGCGACGGCGAG
ATCGTGTTCGGAGTGGCTCACATCTACGCCAGCTTCAACGACACCTTCGT
CCATGTCACGGATCTGTCCGGCCGTGAGACCATCGCTCGTGTCACCGGAG
GCATGAAGGTGAAGGCCGATCGTGATGAGGCTTCGCCCTACGCCGCTATG
TTGGCCGCTCAGGATGTGGCTGAGAAGTGCAAGACACTGGGCATCACTGC
CCTGCATATTAAGCTGCGTGCCACCGGCGGCAACAAGACCAAGACCCCCG
GACCCGGCGCCCAGTCCGCTCTGCGTGCGTTGGCCCGTTCGTCCATGAAG
ATTGGCCGCATCGAGGATGTGACCCCTATCCCATCGGACTCTACCCGCAG
GAAGGGCGGTCGCCGAGGTCGTCGTCTGGCAAGCTTTCTAGACCAT
FMO05173.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS14b-RB | 562 | CG1527-RB | 32..484 | 26..478 | 2265 | 100 | Plus |
| RpS14b-RA | 594 | CG1527-RA | 64..516 | 26..478 | 2265 | 100 | Plus |
| RpS14a-RA | 877 | CG1524-RA | 293..745 | 26..478 | 2115 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7935203..7935440 | 26..263 | 1190 | 100 | Plus |
| X | 23542271 | X | 7934034..7934271 | 26..263 | 1130 | 98.3 | Plus |
| X | 23542271 | X | 7935496..7935714 | 260..478 | 1095 | 100 | Plus |
| X | 23542271 | X | 7934327..7934545 | 260..478 | 1005 | 97.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:59:15 has no hits.
FMO05173.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:23 Download gff for
FMO05173.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS14b-RA | 56..516 | 17..478 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:13:30 Download gff for
FMO05173.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS14b-RA | 50..510 | 17..478 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:53 Download gff for
FMO05173.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS14b-RA | 56..516 | 17..478 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:53 Download gff for
FMO05173.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7935195..7935439 | 17..262 | 98 | -> | Plus |
| X | 7935499..7935714 | 263..478 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:23 Download gff for
FMO05173.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7829228..7829472 | 17..262 | 98 | -> | Plus |
| arm_X | 7829532..7829747 | 263..478 | 100 | | Plus |
