FMO05178.5prime Sequence
397 bp (397 high quality bases) assembled on 2008-08-22
> FMO05178.5prime
TAGCATACCTTATACGAAGTTATCAGTCGACATGGGCGGAAGTGCCAGAG
GCGTGGGGCGGAGGGGCGTGGTCCTGGAGCAGGATGTACGCACAAGGTCG
TCGCAGGGGGAGCGAAAGAGGGGGCTCGCTGGCAAACAGCAGCACAACAA
TGCCAAGCTTCCGCTTAGGATGCGCTCGAACGGAAGTTATTTTGGCCGCC
TGAACGTGAGCGCGCTGCTCATCTACTTGTGGTGCTATCTGCTACTGGTT
ATGGCAGCATCTGGCGGCAGCAACCACGTGGTAAATGGCCTCAAATGCTA
TTGCAATCCGAAGGAGTGCGACGTGATCCGCTCACCCGACTGCCCCGGAA
AAGGACTTATGCTGTGGGATCCATGCAAGGCAAGCTTTCTAGACCAT
FMO05178.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:46:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cmpy-RB | 2737 | CG13253-RB | 357..704 | 32..379 | 1740 | 100 | Plus |
| cmpy-RD | 1638 | CG13253-RD | 373..719 | 32..378 | 1735 | 100 | Plus |
| cmpy-RC | 1622 | CG13253-RC | 357..703 | 32..378 | 1735 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20716798..20717145 | 379..32 | 1740 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:46:01 has no hits.
FMO05178.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:49 Download gff for
FMO05178.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cmpy-RB | 357..708 | 32..384 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:23:55 Download gff for
FMO05178.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13253-RB | 355..706 | 32..384 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:44 Download gff for
FMO05178.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cmpy-RB | 357..708 | 32..384 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:44 Download gff for
FMO05178.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20716794..20717158 | 19..384 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:49 Download gff for
FMO05178.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20709894..20710258 | 19..384 | 97 | <- | Minus |
