FMO05183.5prime Sequence
495 bp (495 high quality bases) assembled on 2008-08-22
> FMO05183.5prime
TATAGCATACCTTATACGAAGTTATCAGTCGACATGAGTTTTCATTTTGC
TGTACTGACCCTTATTTTAACAGCCTTCACAGTTTCTCTGTGTGCTGAAC
AAAAAATTACAAAGAGTGACGCAGGTGAAATACGAATTTTCAAACGTCTT
ATTCCTGCCGATGTTCTACGAGATTTTCCGGGAATGTGCTTTGCTTCAAC
TCGATGTGCCACTGTTGAGCCTGGAAAGTCGTGGGACCTTACTCCATTCT
GCGGTCGATCTACTTGTGTTCAAAATGAGGAAAATGATGCAAAGCTATTC
GAACTCGTAGAAGACTGCGGCCCATTGCCACTGGCGAATGACAAATGTAA
ATTGGACACAGAGAAGACTAATAAAACCGCATCGTTTCCTTATTGCTGCC
CCATCTTTACATGTGACCCCGGTGTTAAATTGGAATACCCCGAGATCGGA
AAGGATAATGACAAAAAGAATTCTGAGGCAAGCTTTCTAGACCAT
FMO05183.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:18:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31997-RB | 729 | CG31997-RB | 158..601 | 34..477 | 2220 | 100 | Plus |
| CG31997-RA | 666 | CG31997-RA | 158..601 | 34..477 | 2220 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:18:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 154782..154965 | 477..294 | 920 | 100 | Minus |
| 4 | 1348131 | 4 | 155765..155903 | 172..34 | 695 | 100 | Minus |
| 4 | 1348131 | 4 | 155026..155149 | 294..171 | 620 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:18:32 has no hits.
FMO05183.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:44 Download gff for
FMO05183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31997-RA | 158..601 | 34..477 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:13:27 Download gff for
FMO05183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31997-RA | 150..593 | 34..477 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:13 Download gff for
FMO05183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31997-RA | 158..601 | 34..477 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:13 Download gff for
FMO05183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 154780..154965 | 294..478 | 99 | <- | Minus |
| 4 | 155027..155147 | 173..293 | 100 | <- | Minus |
| 4 | 155765..155903 | 34..172 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:44 Download gff for
FMO05183.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 175406..175591 | 294..478 | 99 | <- | Minus |
| arm_4 | 175653..175773 | 173..293 | 100 | <- | Minus |
| arm_4 | 176391..176529 | 34..172 | 100 | | Minus |
