Clone FMO05184 Report

Search the DGRC for FMO05184

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:51
Well:84
Vector:pMK33-CFH-BD
Associated Gene/Transcriptl(2)37Ce-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO05184.5prime Sequence

612 bp (464 high quality bases) assembled on 2008-08-22

> FMO05184.5prime
CGTATAGCATACATAAGACGAAGTTATCAATCCACATGCCCTCGGAAAAC
AGAATCAAAATCCTACCCAAGGCGGTGGTCTGCGAGGAGAGCAGCCTGCG
CGGTGACATCACCTTCTCGTCGGGCTGTGTGGTTCATCCGAGTGCCACCG
TTATCGCCGACGCAGGTCCCATAATAATTGGGGAGAATTGCATCATAAAG
GAATATGCCACCGTACCTCACCGCTTGGAGCCGGGCGCCGTTTGGGATGT
CAACAATATCCTGAACATTGGCACTCACAATGTCTTTGAAGTCGGCTGCC
AAGTGGAAGCGGCCAAGATTGGCGATAAGAACGTCTTCAAGAGCAAGTGC
TATGTGGGCCCCGGTGTCACTGTTTCCAGCGGTTGTGTGGTGGGAGCTGG
AATAAAGATCCATGGTAGTCAACGCCTGCCCTAAAACACGATTGTTTATG
GAGAGCAGGGCCTGCAGCGCGAGGCCATCGACAAGCAAGGATCGCATACC
CTGCATATCGACTTCCTGCACAAGGTCCTGCCAAACTATCATCATCTACG
CAAGACCAACTACAATCCCAAGAAGGCGCGCAACGTGGTTGCAAGCTTTC
TAGACCATTCGT

FMO05184.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:08
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)37Ce-RA 708 CG17347-RA 78..632 36..590 2595 97.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19132479..19133021 48..590 2535 97.8 Plus
Blast to na_te.dros performed on 2014-11-28 20:24:07 has no hits.

FMO05184.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:40 Download gff for FMO05184.5prime
Subject Subject Range Query Range Percent Splice Strand
l(2)37Ce-RA 75..638 29..599 96   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:13:29 Download gff for FMO05184.5prime
Subject Subject Range Query Range Percent Splice Strand
l(2)37Ce-RA 69..629 29..591 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:55 Download gff for FMO05184.5prime
Subject Subject Range Query Range Percent Splice Strand
l(2)37Ce-RA 75..638 29..599 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:55 Download gff for FMO05184.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19132484..19133027 53..599 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:40 Download gff for FMO05184.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19132484..19133027 53..599 97   Plus