FMO05185.5prime Sequence
749 bp (749 high quality bases) assembled on 2008-08-22
> FMO05185.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGCGCGACCAGC
ACAATAGTTATGCCCGGTGAGCGAATTGCGGCCATTGAGGAGCTGGCCAA
GAGCAAGCGGGTGATACTCGGACCGGGACTGCGGCGTCTGGATGACACGG
TGGTGGCTAGCAAGGCGGGCCCACTTCGACACAAGGAACCCGGCACCTTC
TGGGTGGACAACTACCAGAGAAGGTACATCCCGGCACGCGGGGATCTCAT
TCTGGGCATTGTGCGAGCCAAGGCGGGCGATCTGTACCGCGTGGACATCG
GAGCAACGGACACAGCCTCCATATCGTATCTCGCCTTTGAGGCGGCCAGC
AAGAAGAATCGCCCGGATCTGATCCCCGGTGATCTGATTTACGCGAGAGT
CCTGAATGCAAGCGCGGACATTGAACCGGAGCTGGTCTGCGTCAACTCGG
TGGGCAAAAGTGGCAAACTGGGCGTCCTCACCGATGGATTCTTCTTCAAG
TGCAGCCTGAATCTGGGAAGGATGCTGCTGCGGGAAAACTGCCCTGTTCT
CGCCGCTCTTACCCGGGAACTGCCCTACGAGATCGCTGTGGGAGTCAACG
GCAGGATATGGTTGAAGGCCCATTCCCTGAAAGAAACCGTGGCCCTCGCC
AATGCCATTTCAGCGCTGGAGCAATCGGGATGTGCGGAAATCGACAAAAT
ATGTGGCAATCTCGGAGACTTCCTGCAGGCCGCAAGCTTTCTAGACCAT
FMO05185.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rrp40-RB | 1031 | CG31938-RB | 98..793 | 36..731 | 3480 | 100 | Plus |
| Rrp40-RA | 844 | CG31938-RA | 98..793 | 36..731 | 3480 | 100 | Plus |
| Eno-RE | 2664 | CG17654-RE | 113..362 | 731..482 | 1250 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1728829..1729524 | 36..731 | 3480 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:58:04 has no hits.
FMO05185.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:54 Download gff for
FMO05185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rrp40-RA | 91..800 | 28..739 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:13:42 Download gff for
FMO05185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31938-RA | 88..793 | 28..732 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:17 Download gff for
FMO05185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rrp40-RA | 91..800 | 28..739 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:17 Download gff for
FMO05185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1728822..1729531 | 28..739 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:54 Download gff for
FMO05185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1728822..1729531 | 28..739 | 98 | | Plus |
