FMO05190.5prime Sequence
900 bp (254 high quality bases) assembled on 2008-08-22
> FMO05190.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTTCCGATTGT
TACCTCGTTTTCCAGGAAAACTATCTATAATGACTGGAGTTACCCCACCA
AAACGCTCTCCCCTTTGGATCGGCACACACAGCGGCACTTTTCACTGCGA
CGAGTTGGTCGCATGTTTTATGCTCAAGCAATTGGATGAGTACAAAAACG
CAGAGATTTTCCGCAGTCGGGACAACAAGGCTTTGAAGGAGAAGTGCGAT
ATAATTGTCGACGTGGCCGGCGTTTATGATCATGCCAAGAATTGTACGAT
CACACCAATAACCTTCAAGGAAACTTTTATTCCGTTCGCCAAAATGTAAT
CAAGGACTACAACGTTGGTCAGGCTAACAGGGGCTGGGATGGGCCTACTG
GCCCTTTGGGCGAAGGGGGTTTTAACAAAGCATCCCGGCACGCGAAAAGG
GAAATAAAACCCCCCCCCCGGAAAAACCTGGCAAAGGGGCTTTTTTTTCA
AATTTTTTGGAATTTTTTTCCCACAAACGGGGACCCCTTTTTAAAAGGGG
ATTGCCCCTTTTTGGGGGGGTTTAAACCATAAAAAAAAAAACCCCCCCTT
TTTTTTTTCCCCCTTTGCAAAAAAAAAACCCCCCCCGGGGGGAAAAAGGG
GGGTAAAAACCCAAAAACAACTTTTAAAAAAAGGGAGAGAGAACCCCCGC
GCCTAGATTTTTGTGAGACAAATTTTGGGAGAGATATTTTTTTGTGTGAC
TACCCCCCCGCGTGAACACTAAAAAGAGTTTCTTAAAATAGAGAAAAAAT
CCCTCCCCCCCCCGGGAATGTTTTTGTGTAAAAAAAACTCCCCGCGCGCA
CGCAATCTCTCTCTTATCAAAAAAAAAGAAATAAGGTGGTGAGGTGTGTC
FMO05190.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11980-RC | 1195 | CG11980-RC | 35..454 | 38..458 | 1525 | 92.5 | Plus |
| CG11980-RB | 1192 | CG11980-RB | 35..451 | 38..458 | 1470 | 91.8 | Plus |
| CG11980-RA | 1179 | CG11980-RA | 44..438 | 63..458 | 1400 | 92 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9004139..9004447 | 63..367 | 1260 | 96.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:24:15 has no hits.
FMO05190.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:44 Download gff for
FMO05190.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11980-RC | 29..368 | 29..367 | 95 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:13:51 Download gff for
FMO05190.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11980-RC | 16..355 | 29..367 | 95 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:00 Download gff for
FMO05190.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11980-RC | 29..368 | 29..367 | 95 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:00 Download gff for
FMO05190.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9004139..9004408 | 63..329 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:44 Download gff for
FMO05190.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4829861..4830130 | 63..329 | 98 | == | Plus |
